RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 AMZ1Q400G9 498 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 BEND6Q5SZJ8 279 aaPredicted RBP11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 FBXO38Q6PIJ6 1188 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 IGF2-ASQ6U949 168 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 TMEM207Q6UWW9 146 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 USP53Q70EK8 1073 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 SPRED1Q7Z699 444 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 OR5AR1Q8NGP9 310 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 EEF1AKMT1Q8WVE0 214 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 PMEPA1Q969W9 287 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 TSPAN17Q96FV3 270 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 CCDC77Q9BR77 488 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 TBC1D10AQ9BXI6 508 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 UNKQ9C0B0 810 aaKnown RBP11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 SEMA6CQ9H3T2 930 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 LATS2Q9NRM7 1088 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 SNX15Q9NRS6 342 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 KLHL42Q9P2K6 505 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 CPNE7Q9UBL6 633 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 FETUBQ9UGM5 382 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 CIDEBQ9UHD4 219 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 SLC24A2Q9UI40 661 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 ENTPD2Q9Y5L3 495 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 HEATR5BQ9P2D3 2071 aa11.23□□□□□ -0.61
CCDC90B-210ENST00000528149 NPEPPSL1A6NEC2 478 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 OR5K4A6NMS3 321 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 FOXO6A8MYZ6 492 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 TSPAN12O95859 305 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 VIPP01282 170 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 ALDOAP04075 364 aaKnown RBP11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 SLC35E2BP0CK96 405 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 ENO3P13929 434 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 H2AFXP16104 143 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 ALDH4A1P30038 563 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 MAPK9P45984 424 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 RGS4P49798 205 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 IRF9Q00978 393 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 ILF2Q12905 390 aaKnown RBP11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 ADGRD1Q6QNK2 874 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 RAPH1Q70E73 1250 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 SLC9B2Q86UD5 537 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 LMNTD1Q8N9Z9 388 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 PHC3Q8NDX5 983 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 ANKRD49Q8WVL7 239 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 TFGQ92734 400 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 SLC46A1Q96NT5 459 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 FERD3LQ96RJ6 166 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 CCNL2Q96S94 520 aaPredicted RBP11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 EPN3Q9H201 632 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 GPAMQ9HCL2 828 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 POT1Q9NUX5 634 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 OGFRQ9NZT2 677 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 IKZF3Q9UKT9 509 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 PLAGL1Q9UM63 463 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 ASF1AQ9Y294 204 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 POLQO75417 2590 aa11.22□□□□□ -0.61
CCDC90B-210ENST00000528149 SPENQ96T58 3664 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 TLDC2A0PJX2 215 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 RHPN2P1A8MT19 583 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 D6RAR5 112 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 RASGRF2O14827 1237 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 SNRPAP09012 282 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 MPC1LP0DKB6 136 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 CBSLP0DN79 551 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 XRCC1P18887 633 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 CNTFP26441 200 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 CD1CP29017 333 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 RBMS1P29558 406 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 CBSP35520 551 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 ETV5P41161 510 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 SKIV2L2P42285 1042 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 FASLGP48023 281 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 RPIAP49247 311 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 IL2P60568 153 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 ZNF844Q08AG5 666 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 PRKG2Q13237 762 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 GPR18Q14330 331 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 KRT33BQ14525 404 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 IGFBP7Q16270 282 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 FOXR1Q6PIV2 292 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 UNC5DQ6UXZ4 953 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 NEK10Q6ZWH5 1172 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 ZNF438Q7Z4V0 828 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 MYO1HQ8N1T3 1032 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 SPATA6LQ8N4H0 392 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 FAM26EQ8N5C1 309 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 RCBTB1Q8NDN9 531 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 NAT6Q93015 286 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 ISL2Q96A47 359 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 PRR11Q96HE9 360 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 ZIM3Q96PE6 472 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 TRIT1Q9H3H1 467 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 LRRN3Q9H3W5 708 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 STN1Q9H668 368 aaKnown RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 POPDC3Q9HBV1 291 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 WDR70Q9NW82 654 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 ARGLU1Q9NWB6 273 aaPredicted RBP11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 EURLQ9NYK6 297 aa11.21□□□□□ -0.61
CCDC90B-210ENST00000528149 NCKIPSDQ9NZQ3 722 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms