RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 RBMXL3Q8N7X1 1067 aaKnown RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 C2CD4AQ8NCU7 369 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 PYROXD1Q8WU10 500 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 PATE1Q8WXA2 126 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 LPGAT1Q92604 370 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 ULK4Q96C45 1275 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CERS2Q96G23 380 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 AHCYL2Q96HN2 611 aaKnown RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 LINC00615Q96LM1 132 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 BARD1Q99728 777 aaKnown RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 ZMYND15Q9H091 742 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 RMI1Q9H9A7 625 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CARS2Q9HA77 564 aaKnown RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 ACSS2Q9NR19 701 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CATSPERZQ9NTU4 200 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 C20orf96Q9NUD7 363 aaPredicted RBP10.62□□□□□ -0.71
NEDD8-204ENST00000526430 ASF1BQ9NVP2 202 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 GALPQ9UBC7 116 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CRLS1Q9UJA2 301 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 ITGB1BP2Q9UKP3 347 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 PSAT1Q9Y617 370 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 CACNA1CQ13936 2221 aa10.62□□□□□ -0.71
NEDD8-204ENST00000526430 TCRBV9S1A1TA0A576 114 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 FAM159BA6NKW6 160 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 OR2AG2A6NM03 316 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 IQCF5A8MTL0 148 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 A8MU76 341 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 GPR89AB7ZAQ6 455 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 PRSS44E7EML9 344 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 POP7O75817 140 aaKnown RBP10.61□□□□□ -0.71
NEDD8-204ENST00000526430 ANKRD34CP0C6C1 535 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 GPR89BP0CG08 455 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 ZNF28P17035 718 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 ZNF7P17097 686 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-204ENST00000526430 OGNP20774 298 aaKnown RBP10.61□□□□□ -0.71
NEDD8-204ENST00000526430 RPS3P23396 243 aaKnown RBP eCLIP10.61□□□□□ -0.712e-15■■■□□ 16.4
NEDD8-204ENST00000526430 SLC1A2P43004 574 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 CLCNKAP51800 687 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 VSNL1P62760 191 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 MPP1Q00013 466 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 FASTKD1Q53R41 847 aaKnown RBP10.61□□□□□ -0.71
NEDD8-204ENST00000526430 CNSTQ6PJW8 725 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 DET1Q7L5Y6 550 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 KCNMB4Q86W47 210 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 CCDC25Q86WR0 208 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 GALNT6Q8NCL4 622 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 ACVR1CQ8NER5 493 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 GSDMBQ8TAX9 411 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 TCF12Q99081 682 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 COPS8Q99627 209 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 PARD6BQ9BYG5 372 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 ING2Q9H160 280 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 CDC42EP4Q9H3Q1 356 aaKnown RBP10.61□□□□□ -0.71
NEDD8-204ENST00000526430 IARS2Q9NSE4 1012 aaKnown RBP10.61□□□□□ -0.71
NEDD8-204ENST00000526430 ZNHIT2Q9UHR6 403 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 FBXO5Q9UKT4 447 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 RAB21Q9UL25 225 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 PCM1Q15154 2024 aa10.61□□□□□ -0.71
NEDD8-204ENST00000526430 CNTRLQ7Z7A1 2325 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 DIAPH2O60879 1101 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 BRAFP15056 766 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 NSG1P42857 185 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 PRLHRP49683 370 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 CCL11P51671 97 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 PGGT1BP53609 377 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 ADARP55265 1226 aaKnown RBP10.6□□□□□ -0.71
NEDD8-204ENST00000526430 DMPKQ09013 629 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 MGAT5Q09328 741 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 SNAP47Q5SQN1 464 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 LYPLAL1Q5VWZ2 237 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 ZNF470Q6ECI4 717 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 WDR93Q6P2C0 686 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 CRTC3Q6UUV7 619 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 CAPN12Q6ZSI9 719 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 CHST15Q7LFX5 561 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-204ENST00000526430 PALM2Q8IXS6 379 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 ST6GALNAC3Q8NDV1 305 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 GDAP1Q8TB36 358 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 OR2M4Q96R27 311 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 FMO2Q99518 471 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 ACTL8Q9H568 366 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 FBXO6Q9NRD1 293 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-204ENST00000526430 LATS2Q9NRM7 1088 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 SCHIP1Q9P0W5 487 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-204ENST00000526430 MOSPD1Q9UJG1 213 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 G3BP2Q9UN86 482 aaKnown RBP10.6□□□□□ -0.71
NEDD8-204ENST00000526430 CDYLQ9Y232 598 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 WDR37Q9Y2I8 494 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 CRYL1Q9Y2S2 319 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 KLF2Q9Y5W3 355 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-204ENST00000526430 DNMT3AQ9Y6K1 912 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-204ENST00000526430 SEC16AO15027 2179 aa10.6□□□□□ -0.71
NEDD8-204ENST00000526430 MN1Q10571 1320 aaPredicted RBP10.59□□□□□ -0.71
NEDD8-204ENST00000526430 NUP210LQ5VU65 1888 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 SLC5A10A0PJK1 596 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 HMX2A2RU54 273 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 KMOO15229 486 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 AP2A2O94973 939 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 MT-ND3P03897 115 aa10.59□□□□□ -0.71
NEDD8-204ENST00000526430 GSTA2P09210 222 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms