RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 DLSTP36957 453 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 SH3BP2P78314 561 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 PLCL1Q15111 1095 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 CRTC2Q53ET0 693 aaPredicted RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 LACTB2Q53H82 288 aaPredicted RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 CAPRIN2Q6IMN6 1127 aaKnown RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 UGT3A1Q6NUS8 523 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 DUS1LQ6P1R4 473 aaKnown RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 CNSTQ6PJW8 725 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 C6orf15Q6UXA7 325 aaPredicted RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 NAPRTQ6XQN6 538 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 C3orf62Q6ZUJ4 267 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 PRSS42Q7Z5A4 293 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 RELL1Q8IUW5 271 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 RASGRP3Q8IV61 690 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 SLC22A15Q8IZD6 547 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 ZBTB2Q8N680 514 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 ZFPM2Q8WW38 1151 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 RSC1A1Q92681 617 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 TFGQ92734 400 aaPredicted RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 ELMO2Q96JJ3 720 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 OR6C1Q96RD1 312 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 AARSD1Q9BTE6 412 aaKnown RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 MVB12BQ9H7P6 319 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 SLC40A1Q9NP59 571 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 TXNDC16Q9P2K2 825 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 KLHL42Q9P2K6 505 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 SLC17A6Q9P2U8 582 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 LNPEPQ9UIQ6 1025 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 CROTQ9UKG9 612 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 NFU1Q9UMS0 254 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
VPS28-204ENST00000526054 MRPS18BQ9Y676 258 aaKnown RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 CFAP20Q9Y6A4 193 aaKnown RBP9.84□□□□□ -0.83
VPS28-204ENST00000526054 FLNCQ14315 2725 aa9.84□□□□□ -0.84
VPS28-204ENST00000526054 NBPF19A0A087WUL8 3843 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 KDM1AO60341 852 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 KIAA0754O94854 1291 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 HAUS5O94927 633 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 SLCO2B1O94956 709 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 RPN2P04844 631 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 ATP5DP30049 168 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 ECHS1P30084 290 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 GPX6P59796 221 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 FOXK1P85037 733 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 NAB1Q13506 487 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 GPR18Q14330 331 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 IL11RAQ14626 422 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 SLMAPQ14BN4 828 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 COLEC12Q5KU26 742 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 FAM45BPQ6NSW5 357 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 IRGCQ6NXR0 463 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 ZNF549Q6P9A3 640 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 CYB5D1Q6P9G0 228 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 KLHL35Q6PF15 583 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 FAM92BQ6ZTR7 304 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 CYS1Q717R9 158 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 STRA8Q7Z7C7 330 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 GPATCH11Q8N954 259 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 GALNT6Q8NCL4 622 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 ACVR1CQ8NER5 493 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 FAM45AQ8TCE6 357 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 SKA2Q8WVK7 121 aaPredicted RBP9.83□□□□□ -0.84
VPS28-204ENST00000526054 FAM136AQ96C01 138 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 ZDHHC12Q96GR4 267 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 ABHD17AQ96GS6 310 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 FOPNLQ96NB1 174 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 FERD3LQ96RJ6 166 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 KIR3DX1Q9H7L2 352 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 LRRC4CQ9HCJ2 640 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 LATS2Q9NRM7 1088 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 SLC24A2Q9UI40 661 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 TRMT6Q9UJA5 497 aaKnown RBP9.83□□□□□ -0.84
VPS28-204ENST00000526054 CDYLQ9Y232 598 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 ASF1AQ9Y294 204 aa9.83□□□□□ -0.84
VPS28-204ENST00000526054 FAM159BA6NKW6 160 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 KIF1CO43896 1103 aaKnown RBP9.82□□□□□ -0.84
VPS28-204ENST00000526054 AHSGP02765 367 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 ENO3P13929 434 aaPredicted RBP9.82□□□□□ -0.84
VPS28-204ENST00000526054 F8A1P23610 371 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 ACADLP28330 430 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 GABRB3P28472 473 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 GP5P40197 560 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 SKIV2L2P42285 1042 aaKnown RBP9.82□□□□□ -0.84
VPS28-204ENST00000526054 CLCN7P51798 805 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 ERV3-1Q14264 604 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 CACHD1Q5VU97 1274 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 LRRC8EQ6NSJ5 796 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 UNC5DQ6UXZ4 953 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 PPP1R3BQ86XI6 285 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 CTAGE3PQ8IX95 158 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 TBC1D21Q8IYX1 336 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 EIF1ADQ8N9N8 165 aaKnown RBP9.82□□□□□ -0.84
VPS28-204ENST00000526054 SIDT2Q8NBJ9 832 aaKnown RBP9.82□□□□□ -0.84
VPS28-204ENST00000526054 OR5K2Q8NHB8 316 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 FBF1Q8TES7 1133 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 INPP5DQ92835 1189 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 NDNQ99608 321 aa9.82□□□□□ -0.84
VPS28-204ENST00000526054 GPR21Q99679 349 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms