RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 IPO13O94829 963 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 EIF2S1P05198 315 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 ITGAXP20702 1163 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 MAGP20916 626 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 ELAVL4P26378 380 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 PEBP1P30086 187 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 CETN2P41208 172 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 NAP1L1P55209 391 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 Q0VFX4 171 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 AIMP2Q13155 320 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 POU6F1Q14863 301 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 ZRSR2Q15696 482 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 RBBP7Q16576 425 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 NKG7Q16617 165 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 TAZQ16635 292 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 CCDC38Q502W7 563 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 TFDP3Q5H9I0 405 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 AGAP7PQ5VUJ5 663 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 IRAK1BP1Q5VVH5 260 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 PRAMEF13Q5VWM6 474 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 FAAH2Q6GMR7 532 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 ITPRIPL1Q6GPH6 555 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 MRPL14Q6P1L8 145 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 FIGLAQ6QHK4 219 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 KIRREL2Q6UWL6 708 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 IGFL3Q6UXB1 125 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 OVCH1Q7RTY7 1134 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 CARFQ8N187 725 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 ST6GALNAC3Q8NDV1 305 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 FLVCR1-AS1Q8TAF5 88 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 FAR1Q8WVX9 515 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 TM9SF4Q92544 642 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD44-221ENST00000526000 C8orf44Q96CB5 159 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 CDKN2AIPNLQ96HQ2 116 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 AGAP4Q96P64 663 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 IP6K3Q96PC2 410 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 VAT1Q99536 393 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 WDR77Q9BQA1 342 aaPredicted RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 DPH2Q9BQC3 489 aaPredicted RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 DESI2Q9BSY9 194 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 LACRTQ9GZZ8 138 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 EURLQ9NYK6 297 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 COPG2Q9UBF2 871 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 MYO7BQ6PIF6 2116 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 ZNF106Q9H2Y7 1883 aaKnown RBP6.32□□□□□ -1.4
CD44-221ENST00000526000 POLEQ07864 2286 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 CROCCQ5TZA2 2017 aa6.32□□□□□ -1.4
CD44-221ENST00000526000 TEP1Q99973 2627 aaKnown RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 TRGV8A0A0C4DH27 118 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 CCDC162PA2VCL2 907 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 KRT87PA6NCN2 255 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 RCCD1A6NED2 376 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 IQCF5A8MTL0 148 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 HACD1B0YJ81 288 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 E2F3O00716 465 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ZNHIT1O43257 154 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 KIF5CO60282 957 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 JRKO75564 520 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ZNF189O75820 626 aaPredicted RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 IGHEP01854 428 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 UQCRHP07919 91 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 CELA2AP08217 269 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 RBP3P10745 1247 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 PYGMP11217 842 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 MMP11P24347 488 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ACRV1P26436 265 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ACADLP28330 430 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 SHMT2P34897 504 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 CD151P48509 253 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ZNF140P52738 457 aaPredicted RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 PER3P56645 1201 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 VSX2P58304 361 aaPredicted RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 COPS2P61201 443 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 YBX1P67809 324 aaKnown RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 HSPA14Q0VDF9 509 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ZNF169Q14929 603 aaPredicted RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 SF1Q15637 639 aaKnown RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 ZNF658BQ4V348 819 aaPredicted RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 SYTL3Q4VX76 610 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 B3GNTL1Q67FW5 361 aaPredicted RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 FCRL6Q6DN72 434 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 TLDC1Q6P9B6 456 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 BBS12Q6ZW61 710 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 LDB1Q86U70 411 aaPredicted RBP6.31□□□□□ -1.4
CD44-221ENST00000526000 TICAM1Q8IUC6 712 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 VRK3Q8IV63 474 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 SPNS2Q8IVW8 549 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 TBC1D21Q8IYX1 336 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 KRT222Q8N1A0 295 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 SIRT6Q8N6T7 355 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 UBL4BQ8N7F7 174 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 LRRC57Q8N9N7 239 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 PROKR1Q8TCW9 393 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 HEXDCQ8WVB3 486 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 MOCOSQ96EN8 888 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 C17orf62Q9BQA9 187 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 EPS8L2Q9H6S3 715 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 ZNF160Q9HCG1 818 aa6.31□□□□□ -1.4
CD44-221ENST00000526000 CUTCQ9NTM9 273 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms