RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 PRKAR1AP10644 381 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 PEBP1P30086 187 aaKnown RBP16.9■□□□□ 0.3
NR1H3-228ENST00000525441 CLCN7P51798 805 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 ARL4CP56559 192 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 LINC00303Q3SY05 128 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 MSS51Q4VC12 460 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 ACSBG2Q5FVE4 666 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 HIBCHQ6NVY1 386 aaPredicted RBP16.9■□□□□ 0.3
NR1H3-228ENST00000525441 C16orf46Q6P387 395 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 NEK10Q6ZWH5 1172 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 LINC01555Q8NAE3 123 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 SEC14L1Q92503 715 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 MR1Q95460 341 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 LRRC39Q96DD0 335 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 CLIP3Q96DZ5 547 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 KRT12Q99456 494 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 TRIM51Q9BSJ1 452 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 GPR87Q9BY21 358 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 FAM117AQ9C073 453 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 ACTR5Q9H9F9 607 aaPredicted RBP16.9■□□□□ 0.3
NR1H3-228ENST00000525441 FAM114A2Q9NRY5 505 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 SPATA7Q9P0W8 599 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 CIDEBQ9UHD4 219 aa16.9■□□□□ 0.3
NR1H3-228ENST00000525441 TSR3Q9UJK0 312 aaKnown RBP16.9■□□□□ 0.3
NR1H3-228ENST00000525441 RUVBL2Q9Y230 463 aaKnown RBP16.9■□□□□ 0.3
NR1H3-228ENST00000525441 EFCAB8A8MWE9 144 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 VPS26AO75436 327 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 BANF1O75531 89 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 SEC31AO94979 1220 aaKnown RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 CATP04040 527 aaKnown RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 ENO3P13929 434 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 F8A1P23610 371 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 CCR10P46092 362 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 ITGA8P53708 1063 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 ETF1P62495 437 aaKnown RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 RPS15P62841 145 aaKnown RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 MPP1Q00013 466 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 GPS2Q13227 327 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 SF1Q15637 639 aaKnown RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 HIF1AQ16665 826 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 KLHL38Q2WGJ6 581 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 TAX1BP1Q86VP1 789 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 C2orf73Q8N5S3 287 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 C2CD4AQ8NCU7 369 aaPredicted RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 BBOF1Q8ND07 529 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 HMGCLL1Q8TB92 370 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 INPP5DQ92835 1189 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 TRIM31Q9BZY9 425 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 FAM60AQ9NP50 221 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 GALPQ9UBC7 116 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 ZC3H7BQ9UGR2 993 aaKnown RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 MRPS18BQ9Y676 258 aaKnown RBP16.89■□□□□ 0.29
NR1H3-228ENST00000525441 AP1M2Q9Y6Q5 423 aa16.89■□□□□ 0.29
NR1H3-228ENST00000525441 PIEZO2Q9H5I5 2752 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 MEN1O00255 615 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 FANCGO15287 622 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 OR2B3O76000 313 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 HAUS5O94927 633 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 RECKO95980 971 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 ERVK-10P10266 1014 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 OAS2P29728 719 aaKnown RBP16.88■□□□□ 0.29
NR1H3-228ENST00000525441 ZIC1Q15915 447 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 PRAMEF17Q5VTA0 474 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 UGT3A1Q6NUS8 523 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 ZNF549Q6P9A3 640 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 KIAA0408Q6ZU52 694 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 MAATS1Q7Z4T9 603 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 DSELQ8IZU8 1212 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 OR9A1PQ8NGU1 263 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 CERS2Q96G23 380 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 GPR21Q99679 349 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 DPH2Q9BQC3 489 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-228ENST00000525441 AARSD1Q9BTE6 412 aaKnown RBP16.88■□□□□ 0.29
NR1H3-228ENST00000525441 ADNPQ9H2P0 1102 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 PPANQ9NQ55 473 aaKnown RBP16.88■□□□□ 0.29
NR1H3-228ENST00000525441 IRAK4Q9NWZ3 460 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 PLCL2Q9UPR0 1127 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 CHMP2BQ9UQN3 213 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 DHRS7Q9Y394 339 aa16.88■□□□□ 0.29
NR1H3-228ENST00000525441 COL6A6A6NMZ7 2263 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 SPTBP11277 2137 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 FAM187AA6NFU0 413 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 ZNF839A8K0R7 811 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 ARHGEF33A8MVX0 844 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 EIF3FO00303 357 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-228ENST00000525441 ZNF749O43361 778 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 PSIP1O75475 530 aaKnown RBP16.87■□□□□ 0.29
NR1H3-228ENST00000525441 CREG1O75629 220 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 C1QL1O75973 258 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 F7P08709 466 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-228ENST00000525441 FAM87AP0C7U9 286 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 MPC1LP0DKB6 136 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 CBSLP0DN79 551 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 MAGP20916 626 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 PTPN4P29074 926 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 RORAP35398 523 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 CBSP35520 551 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 HSD17B2P37059 387 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 ELK3P41970 407 aa16.87■□□□□ 0.29
NR1H3-228ENST00000525441 NAA25Q14CX7 972 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms