RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 OTCP00480 354 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 KRT16P08779 473 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 ELFN1P0C7U0 828 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 GPR89BP0CG08 455 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 ATP1B2P14415 290 aaPredicted RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 XPAP23025 273 aaPredicted RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 CCND1P24385 295 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 AOAHP28039 575 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 CD38P28907 300 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SOX11P35716 441 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 CTSKP43235 329 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 KCNJ2P63252 427 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 CLCQ05315 142 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 PCDH1Q08174 1060 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 KLF10Q13118 480 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 STX5Q13190 355 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SQLEQ14534 574 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SHBQ15464 509 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SNCBQ16143 134 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 GSTA3Q16772 222 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 PFKFB4Q16877 469 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 LSM12Q3MHD2 195 aaKnown RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 UGT3A2Q3SY77 523 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 TMEM52BQ4KMG9 183 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 BCL7AQ4VC05 210 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 ATP13A5Q4VNC0 1218 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SLC9B1Q4ZJI4 515 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 C10orf62Q5T681 223 aaPredicted RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 C6orf163Q5TEZ5 329 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 HACD2Q6Y1H2 254 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 FRA10AC1Q70Z53 315 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 NET1Q7Z628 596 aaPredicted RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 PIP4P1Q86T03 277 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 TTC7BQ86TV6 843 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 TSPAN33Q86UF1 283 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 TRIM69Q86WT6 500 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 HORMAD1Q86X24 394 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 TREML1Q86YW5 311 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 PHYKPLQ8IUZ5 450 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 NAXDQ8IW45 347 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 KLHDC8AQ8IYD2 350 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 PNPLA1Q8N8W4 532 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 KDF1Q8NAX2 398 aaPredicted RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 SIDT2Q8NBJ9 832 aaKnown RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 FBXO15Q8NCQ5 510 aaPredicted RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 MAPK15Q8TD08 544 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 AGAP11Q8TF27 550 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 SETD7Q8WTS6 366 aaKnown RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 EEF1AKMT1Q8WVE0 214 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 JADE3Q92613 823 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 GLMNQ92990 594 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 UTP4Q969X6 686 aaKnown RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 PHF21BQ96EK2 531 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 C19orf60Q96EN9 201 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 COQ10AQ96MF6 247 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 ZBTB26Q9HCK0 441 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 PREBQ9HCU5 417 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 BPIFA1Q9NP55 256 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 PCDH12Q9NPG4 1184 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 MRPL40Q9NQ50 206 aaKnown RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 TM7SF3Q9NS93 570 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 PTBP2Q9UKA9 531 aaKnown RBP6.91□□□□□ -1.3
VPS11-201ENST00000524454 COQ6Q9Y2Z9 468 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 FADS3Q9Y5Q0 445 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 ST14Q9Y5Y6 855 aa6.91□□□□□ -1.3
VPS11-201ENST00000524454 CACNA1EQ15878 2313 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SERTM1A2A2V5 107 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 NPEPPSL1A6NEC2 478 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 NEMP2A6NFY4 417 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 A8MX80 341 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 NPIPB8E9PQR5 432 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 UBXN8O00124 270 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 TLR4O00206 839 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 CDC7O00311 574 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 E2F3O00716 465 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 NEMP1O14524 444 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 CHUKO15111 745 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 VILLO15195 856 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 FFAR2O15552 330 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 CCNT2O60583 730 aaKnown RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 UGDHO60701 494 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 MMP20O60882 483 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SLCO2B1O94956 709 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 WDR47O94967 919 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 SLC25A14O95258 325 aaPredicted RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 MATN4O95460 622 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 ATP6V1G2O95670 118 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 PAK4O96013 591 aaPredicted RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 ADRB1P08588 477 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 F7P08709 466 aaPredicted RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 PRR35P0CG20 571 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 PRSS56P0CW18 603 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 COX4I1P13073 169 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 IDO1P14902 403 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 ACPPP15309 386 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 EEF1DP29692 281 aaKnown RBP6.9□□□□□ -1.3
VPS11-201ENST00000524454 CPOXP36551 454 aa6.9□□□□□ -1.3
VPS11-201ENST00000524454 GMPRP36959 345 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms