RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 OLIG1Q8TAK6 271 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 DEPDC1BQ8WUY9 529 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 OTULINQ96BN8 352 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 SGF29Q96ES7 293 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 CNOT6LQ96LI5 555 aaKnown RBP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 MRPL9Q9BYD2 267 aaKnown RBP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 FBRSL1Q9HCM7 1045 aaKnown RBP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 PTPRHQ9HD43 1115 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 SMC4Q9NTJ3 1288 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 SLC9A2Q9UBY0 812 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 SIX4Q9UIU6 781 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 FBXW11Q9UKB1 542 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 DERAQ9Y315 318 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 COMMD10Q9Y6G5 202 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 ABCA4P78363 2273 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 CBY3A6NI87 242 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 FAM72CH0Y354 149 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 FGF17O60258 216 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ICAM1P05362 532 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 CHRM4P08173 479 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 HNRNPA1P09651 372 aaKnown RBP eCLIP3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF853P0CG23 659 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF883P0CG24 379 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 MARK3P27448 753 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ADD2P35612 726 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 KRT2P35908 639 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 PIGAP37287 484 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 FUT6P51993 359 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF33AQ06730 810 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 MVPQ14764 893 aaKnown RBP3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 OASLQ15646 514 aaKnown RBP3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 CTXN3Q4LDR2 81 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 LIN9Q5TKA1 542 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 FAM72AQ5TYM5 149 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 TMEM198Q66K66 360 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 FAM72DQ6L9T8 149 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 IL20RBQ6UXL0 311 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 KDM7AQ6ZMT4 941 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 RABEPKQ7Z6M1 372 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 FAM228AQ86W67 206 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ZC3HC1Q86WB0 502 aaKnown RBP3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 CHD1LQ86WJ1 897 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 FAM72BQ86X60 149 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 MFSD6LQ8IWD5 586 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 SDR42E1Q8WUS8 393 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 TANKQ92844 425 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 SMARCD2Q92925 531 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 C3orf30Q96M34 536 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 TAAR1Q96RJ0 339 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 CCNL2Q96S94 520 aaPredicted RBP3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 CSF3RQ99062 836 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 NOX4Q9NPH5 578 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ASCL3Q9NQ33 180 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 PIH1D3Q9NQM4 214 aaKnown RBP3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF71Q9NQZ8 489 aaPredicted RBP3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 CYSLTR2Q9NS75 346 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 TBC1D13Q9NVG8 400 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 CLIP2Q9UDT6 1046 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 ENTPD4Q9Y227 616 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 DAAM1Q9Y4D1 1078 aa3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 COL27A1Q8IZC6 1860 aaPredicted RBP3.67□□□□□ -1.82
NSMCE2-211ENST00000523549 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 RNF212BA8MTL3 300 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 B4DLN1 442 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 CHADO15335 359 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 ATP2C2O75185 946 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 RGS11O94810 467 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 KRT5P13647 590 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 CD1EP15812 388 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 MCM3P25205 808 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 CCR2P41597 374 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 MATKP42679 507 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 MRPL12P52815 198 aaKnown RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 HDAC4P56524 1084 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 ERVPABLB-1P60509 514 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 RUNX1T1Q06455 604 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 EFNB3Q15768 340 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 STXBP2Q15833 593 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 PDCD2Q16342 344 aaPredicted RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 SYT16Q17RD7 645 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 EIF2S3LQ2VIR3 472 aaKnown RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 HLA-BQ31612 363 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 AMZ1Q400G9 498 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 ESCO2Q56NI9 601 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 SPDYCQ5MJ68 293 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 GORABQ5T7V8 394 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 RSRC2Q7L4I2 434 aaKnown RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 FAM160B2Q86V87 743 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 HEATR4Q86WZ0 1026 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 RPAP2Q8IXW5 612 aaPredicted RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 VPS37AQ8NEZ2 397 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 SPATA22Q8NHS9 363 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 CREB3L4Q8TEY5 395 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 TRAPPC12Q8WVT3 735 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 HTR3CQ8WXA8 447 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 FIG4Q92562 907 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 SNAPC3Q92966 411 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 SH3KBP1Q96B97 665 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF501Q96CX3 271 aaPredicted RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 MBOAT7Q96N66 472 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms