RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TTC27Q6P3X3 843 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 OTOAQ7RTW8 1153 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 MPP5Q8N3R9 675 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 GSDMBQ8TAX9 411 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 FAM136AQ96C01 138 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 MS4A14Q96JA4 679 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 DPH2Q9BQC3 489 aaPredicted RBP19.93■□□□□ 0.78
SDCBP-209ENST00000522243 CHRNA10Q9GZZ6 450 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 MRM3Q9HC36 420 aaKnown RBP19.93■□□□□ 0.78
SDCBP-209ENST00000522243 SOX13Q9UN79 622 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 PLCL2Q9UPR0 1127 aa19.93■□□□□ 0.78
SDCBP-209ENST00000522243 ZNF185O15231 689 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 ZSCAN9O15535 394 aaPredicted RBP19.92■□□□□ 0.78
SDCBP-209ENST00000522243 NRDCO43847 1150 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 NIPSNAP2O75323 286 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 KRT14P02533 472 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 OTX2P32243 289 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 GRIA3P42263 894 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 MLLT10P55197 1068 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 FOXL2P58012 376 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 CDK16Q00536 496 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 ANKRD22Q5VYY1 191 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 TTC23LQ6PF05 361 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 SDCCAG8Q86SQ7 713 aaPredicted RBP19.92■□□□□ 0.78
SDCBP-209ENST00000522243 LRRC6Q86X45 466 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 OR2L8Q8NGY9 312 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 GBP5Q96PP8 586 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 TRIM56Q9BRZ2 755 aaKnown RBP19.92■□□□□ 0.78
SDCBP-209ENST00000522243 TXLNGQ9NUQ3 528 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 EURLQ9NYK6 297 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 GPN3Q9UHW5 284 aaPredicted RBP19.92■□□□□ 0.78
SDCBP-209ENST00000522243 PLAAQ9Y263 795 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 PADI2Q9Y2J8 665 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 CRYL1Q9Y2S2 319 aa19.92■□□□□ 0.78
SDCBP-209ENST00000522243 SPTA1P02549 2419 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 A6NL46 340 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 RASGRF2O14827 1237 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 KPNA5O15131 536 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 C1orf105O95561 183 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 PGDP52209 483 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 DCDP81605 110 aaKnown RBP19.91■□□□□ 0.78
SDCBP-209ENST00000522243 ATP1A4Q13733 1029 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 SF1Q15637 639 aaKnown RBP19.91■□□□□ 0.78
SDCBP-209ENST00000522243 MRNIPQ6NTE8 343 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 CASC4Q6P4E1 433 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 TLDC1Q6P9B6 456 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 CNSTQ6PJW8 725 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 MAGOHBQ96A72 148 aaKnown RBP19.91■□□□□ 0.78
SDCBP-209ENST00000522243 RAD51AP1Q96B01 352 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 BIRC8Q96P09 236 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 IL1RAPL1Q9NZN1 696 aa19.91■□□□□ 0.78
SDCBP-209ENST00000522243 IFT80Q9P2H3 777 aaPredicted RBP19.91■□□□□ 0.78
SDCBP-209ENST00000522243 PTRH2Q9Y3E5 179 aaKnown RBP19.91■□□□□ 0.78
SDCBP-209ENST00000522243 MYO18BQ8IUG5 2567 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 SEC16AO15027 2179 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-209ENST00000522243 KLF7O75840 302 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-209ENST00000522243 S1PR4O95977 384 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 F7P08709 466 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-209ENST00000522243 PSMB5P28074 263 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 SARNPP82979 210 aaKnown RBP19.9■□□□□ 0.78
SDCBP-209ENST00000522243 TYSND1Q2T9J0 566 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 FCRL6Q6DN72 434 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 KIAA0930Q6ICG6 404 aaPredicted RBP19.9■□□□□ 0.78
SDCBP-209ENST00000522243 FIGLAQ6QHK4 219 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 CAND1Q86VP6 1230 aaKnown RBP19.9■□□□□ 0.78
SDCBP-209ENST00000522243 RAB43Q86YS6 212 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 MCATQ8IVS2 390 aaKnown RBP19.9■□□□□ 0.78
SDCBP-209ENST00000522243 TMEM151BQ8IW70 566 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 RASGEF1CQ8N431 466 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 FDCSPQ8NFU4 85 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 PROKR1Q8TCW9 393 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 LPGAT1Q92604 370 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 SLC22A18Q96BI1 424 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 NDC1Q9BTX1 674 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 DHRS4Q9BTZ2 278 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 GALPQ9UBC7 116 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 NDOR1Q9UHB4 597 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 SRPK3Q9UPE1 567 aa19.9■□□□□ 0.78
SDCBP-209ENST00000522243 PCDHGA9Q9Y5G4 932 aaKnown RBP19.9■□□□□ 0.78
SDCBP-209ENST00000522243 GOLGA8MH3BSY2 632 aa19.89■□□□□ 0.77
SDCBP-209ENST00000522243 CNOT3O75175 753 aaKnown RBP19.89■□□□□ 0.77
SDCBP-209ENST00000522243 ALAS2P22557 587 aa19.89■□□□□ 0.77
SDCBP-209ENST00000522243 NADK2Q4G0N4 442 aa19.89■□□□□ 0.77
SDCBP-209ENST00000522243 NUDT9Q9BW91 350 aa19.89■□□□□ 0.77
SDCBP-209ENST00000522243 MLXIPLQ9NP71 852 aa19.89■□□□□ 0.77
SDCBP-209ENST00000522243 INTS7Q9NVH2 962 aaKnown RBP19.89■□□□□ 0.77
SDCBP-209ENST00000522243 PRICKLE3O43900 615 aaPredicted RBP19.88■□□□□ 0.77
SDCBP-209ENST00000522243 CHRM3P20309 590 aa19.88■□□□□ 0.77
SDCBP-209ENST00000522243 OGNP20774 298 aaKnown RBP19.88■□□□□ 0.77
SDCBP-209ENST00000522243 MCM3P25205 808 aa19.88■□□□□ 0.77
SDCBP-209ENST00000522243 COILP38432 576 aaPredicted RBP19.88■□□□□ 0.77
SDCBP-209ENST00000522243 FOLR3P41439 243 aa19.88■□□□□ 0.77
SDCBP-209ENST00000522243 MAGEA6P43360 314 aa19.88■□□□□ 0.77
SDCBP-209ENST00000522243 RAPSNQ13702 412 aa19.88■□□□□ 0.77
SDCBP-209ENST00000522243 NKAIN1Q4KMZ8 207 aa19.88■□□□□ 0.77
SDCBP-209ENST00000522243 RNF187Q5TA31 235 aaPredicted RBP19.88■□□□□ 0.77
SDCBP-209ENST00000522243 CENPUQ71F23 418 aa19.88■□□□□ 0.77
SDCBP-209ENST00000522243 MED25Q71SY5 747 aa19.88■□□□□ 0.77
SDCBP-209ENST00000522243 SPNS2Q8IVW8 549 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms