RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 HGH1Q9BTY7 390 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 EPN3Q9H201 632 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 KIR3DX1Q9H7L2 352 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 TMEM74BQ9NUR3 256 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 POT1Q9NUX5 634 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 OPTCQ9UBM4 332 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 PCDHGA5Q9Y5G8 931 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 COLEC10Q9Y6Z7 277 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 FRYLO94915 3013 aa12.69□□□□□ -0.38
CPNE3-205ENST00000522240 CACNA1EQ15878 2313 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 LRRC14BA6NHZ5 514 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 OR52A4PA6NMU1 304 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 LMO7DNF2Z398 122 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 AQP9O43315 295 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 DFNA5O60443 496 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 STK16O75716 305 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 MLYCDO95822 493 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 EML2O95834 649 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 SLC16A8O95907 504 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 CELA2BP08218 269 aaPredicted RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 CCND1P24385 295 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 PKLRP30613 574 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 ARRB2P32121 409 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 HSPA7P48741 367 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 ARRB1P49407 418 aaPredicted RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 AGTR2P50052 363 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 HK2P52789 917 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 CBX1P83916 185 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 BNC1Q01954 994 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 LCP2Q13094 533 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 PRKAA1Q13131 559 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 SWT1Q5T5J6 900 aaKnown RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 DUS1LQ6P1R4 473 aaKnown RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 IYDQ6PHW0 289 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 AGTRAPQ6RW13 159 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 PRR23BQ6ZRT6 265 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 FAM47EQ6ZV65 393 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 RBM12BQ8IXT5 1001 aaKnown RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 OR56A3Q8NH54 315 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 HMGCLL1Q8TB92 370 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 LMX1AQ8TE12 382 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 ZNF480Q8WV37 535 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 GRAMD1AQ96CP6 724 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 CXorf40BQ96DE9 158 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 FERD3LQ96RJ6 166 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 SORT1Q99523 831 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 ELF4Q99607 663 aaPredicted RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 MENTQ9BUN1 341 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 EML4Q9HC35 981 aaKnown RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 CAPN10Q9HC96 672 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 SLCO1B3Q9NPD5 702 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 FGFR1OP2Q9NVK5 253 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 SCHIP1Q9P0W5 487 aaPredicted RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 SNX11Q9Y5W9 270 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 CFAP20Q9Y6A4 193 aaKnown RBP12.68□□□□□ -0.38
CPNE3-205ENST00000522240 CSNK1G3Q9Y6M4 447 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 PCDH15Q96QU1 1955 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 OTOGLQ3ZCN5 2332 aa12.68□□□□□ -0.38
CPNE3-205ENST00000522240 ITM2AO43736 263 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 KATNA1O75449 491 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 TGDSO95455 350 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 XRCC1P18887 633 aaPredicted RBP12.67□□□□□ -0.38
CPNE3-205ENST00000522240 DRD4P21917 467 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 PNLIPRP1P54315 467 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 PKNOX1P55347 436 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 TBPL1P62380 186 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 UBE2IP63279 158 aaKnown RBP12.67□□□□□ -0.38
CPNE3-205ENST00000522240 CLCQ05315 142 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 GRIK2Q13002 908 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 C1orf61Q13536 156 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 KRT33BQ14525 404 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 TCEA2Q15560 299 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 CYP2A13Q16696 494 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 PTCHD3Q3KNS1 767 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 ARL13AQ5H913 290 aaPredicted RBP12.67□□□□□ -0.38
CPNE3-205ENST00000522240 SLC23A3Q6PIS1 610 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 IL27RAQ6UWB1 636 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 GOLGA7Q7Z5G4 137 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 CRLF3Q8IUI8 442 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 LSMEM2Q8N112 164 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 SFRP1Q8N474 314 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 CAMK1GQ96NX5 476 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 ZNF382Q96SR6 550 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 SGPP1Q9BX95 441 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 PITPNM3Q9BZ71 974 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 C20orf27Q9GZN8 174 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 SLC32A1Q9H598 525 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 DNAJC11Q9NVH1 559 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 ZNF624Q9P2J8 865 aaPredicted RBP12.67□□□□□ -0.38
CPNE3-205ENST00000522240 LNPEPQ9UIQ6 1025 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 RAB23Q9ULC3 237 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 DOLKQ9UPQ8 538 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 RAP2CQ9Y3L5 183 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 ASB1Q9Y576 335 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 DMXL1Q9Y485 3027 aa12.67□□□□□ -0.38
CPNE3-205ENST00000522240 TMEM131Q92545 1883 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 A0A1B0GTQ1 180 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 FAM221BA6H8Z2 402 aa12.66□□□□□ -0.38
CPNE3-205ENST00000522240 KRT87PA6NCN2 255 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms