RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 NOP14P78316 857 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ECT2LQ008S8 904 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 UBXN1Q04323 297 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 YWHAHQ04917 246 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 FAM27E3Q08E93 113 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 TBL3Q12788 808 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 LRMPQ12912 555 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CUL2Q13617 745 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SYCP1Q15431 976 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 PTPN14Q15678 1187 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 PSMD5Q16401 504 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 RPE65Q16518 533 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 EXOC3L4Q17RC7 722 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SOWAHAQ2M3V2 549 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF699Q32M78 642 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 PLPP4Q5VZY2 271 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SPOPLQ6IQ16 392 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SLC8B1Q6J4K2 584 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF280DQ6N043 979 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 PRSS55Q6UWB4 352 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 GBP6Q6ZN66 633 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ENOSF1Q7L5Y1 443 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 UNC93AQ86WB7 457 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ADGRF2Q8IZF7 708 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CRYBG2Q8N1P7 616 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 TTC39CQ8N584 583 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 DEFB123Q8N688 67 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SETD9Q8NE22 299 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 DNAAF1Q8NEP3 725 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 OR4N2Q8NGD1 307 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 LNX1Q8TBB1 728 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 GDPD5Q8WTR4 605 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 JAKMIP2Q96AA8 810 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 MAELQ96JY0 434 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 B3GALT6Q96L58 329 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 FAM81BQ96LP2 452 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 NAP1L5Q96NT1 182 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ERGIC2Q96RQ1 377 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CD180Q99467 661 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CDCA3Q99618 268 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CDX2Q99626 313 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 RTP3Q9BQQ7 232 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CLSTN3Q9BQT9 956 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ACBD6Q9BR61 282 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 MRPL45Q9BRJ2 306 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CRACR2AQ9BSW2 395 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 NPFFR1Q9GZQ6 430 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 DNAI2Q9GZS0 605 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SDCBP2Q9H190 292 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SNX25Q9H3E2 840 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 FAM124BQ9H5Z6 455 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 RETREG1Q9H6L5 497 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SMYD3Q9H7B4 428 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 TLE6Q9H808 572 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SIX2Q9NPC8 291 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 UBE2TQ9NPD8 197 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 OCIAD1Q9NX40 245 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 MTMR10Q9NXD2 777 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ALKBH4Q9NXW9 302 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 DDX43Q9NXZ2 648 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 MTRRQ9UBK8 725 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CD207Q9UJ71 328 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 FBXL5Q9UKA1 691 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CDH9Q9ULB4 789 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 KIAA1257Q9ULG3 409 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 BARX2Q9UMQ3 279 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 MTCH2Q9Y6C9 303 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 COL4A6Q14031 1691 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 MYH9P35579 1960 aaKnown RBP3.22□□□□□ -1.89
VPS13B-209ENST00000521559 LTBP2Q14767 1821 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 IGLV5-37A0A075B6J1 123 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 A0A1B0GVC2 190 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 FSD2A1L4K1 749 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 MYBPHLA2RUH7 354 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 C17orf100A8MU93 164 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 A8MXQ7 604 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 PEX12O00623 359 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 PER2O15055 1255 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TEX28O15482 410 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ATP2C2O75185 946 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 GUCY1B2O75343 617 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NOL4O94818 638 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 POLBP06746 335 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TPM3P06753 285 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 UCHL3P15374 230 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 LMO2P25791 158 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 OR1D2P34982 312 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 CENPAP49450 140 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 PDLIM4P50479 330 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 CLCN4P51793 760 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NDST1P52848 882 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 RAD23BP54727 409 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 MFAP3P55082 362 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ARPP19P56211 112 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 YWHAEP62258 255 aaKnown RBP3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TSPY1Q01534 308 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 GCNT1Q02742 428 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 EEF1A2Q05639 463 aaKnown RBP3.22□□□□□ -1.89
VPS13B-209ENST00000521559 INCA1Q0VD86 236 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 SMARCB1Q12824 385 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms