RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ZNF701Q9NV72 531 aaPredicted RBP4.67□□□□□ -1.66
SKP1-208ENST00000521216 DDX43Q9NXZ2 648 aaKnown RBP4.67□□□□□ -1.66
SKP1-208ENST00000521216 TBC1D7Q9P0N9 293 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 GAB2Q9UQC2 676 aa4.67□□□□□ -1.66
SKP1-208ENST00000521216 TSPY2A6NKD2 308 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 A8MXE2 369 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 HHLA1C9JL84 531 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 TRMUO75648 421 aaKnown RBP4.66□□□□□ -1.66
SKP1-208ENST00000521216 C22orf31O95567 290 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 EDN1P05305 212 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 FYNP06241 537 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 ATP5BP06576 529 aaKnown RBP4.66□□□□□ -1.66
SKP1-208ENST00000521216 HMBSP08397 361 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 PATE4P0C8F1 98 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 CFC1BP0CG36 223 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 CFC1P0CG37 223 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 TSPY3P0CV98 308 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 TSPY8P0CW00 308 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 CYP11B2P19099 503 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 CDH3P22223 829 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 ACHEP22303 614 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 EEF1B2P24534 225 aaKnown RBP4.66□□□□□ -1.66
SKP1-208ENST00000521216 CCR10P46092 362 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 RPL21P46778 160 aaKnown RBP4.66□□□□□ -1.66
SKP1-208ENST00000521216 TSPY1Q01534 308 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 ACSM1Q08AH1 577 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 GPR17Q13304 367 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 CA9Q16790 459 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 MCMDC2Q4G0Z9 681 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 KRBOX4Q5JUW0 171 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 FFAR4Q5NUL3 377 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 ZNF449Q6P9G9 518 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 CHST3Q7LGC8 479 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 ARSGQ96EG1 525 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 OTUB1Q96FW1 271 aaPredicted RBP4.66□□□□□ -1.66
SKP1-208ENST00000521216 DUX3Q96PT4 197 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 CPNE1Q99829 537 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 AP1M1Q9BXS5 423 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 INTS9Q9NV88 658 aaKnown RBP4.66□□□□□ -1.66
SKP1-208ENST00000521216 SPHK1Q9NYA1 384 aa4.66□□□□□ -1.66
SKP1-208ENST00000521216 IGHV4-61A0A0C4DH41 118 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 A0A1W2PPQ1 181 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 PLGP00747 810 aaPredicted RBP4.65□□□□□ -1.67
SKP1-208ENST00000521216 IGHV4-59P01825 116 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 CCDC175P0C221 793 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 HAPLN1P10915 354 aaPredicted RBP4.65□□□□□ -1.67
SKP1-208ENST00000521216 HSPA4P34932 840 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 ASCL1P50553 236 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 POLR2LP62875 67 aaKnown RBP4.65□□□□□ -1.67
SKP1-208ENST00000521216 MAT1AQ00266 395 aaKnown RBP4.65□□□□□ -1.67
SKP1-208ENST00000521216 COG2Q14746 738 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 TCTE1Q5JU00 501 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 SPDYCQ5MJ68 293 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 PRR27Q6MZM9 219 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 FAM53AQ6NSI3 398 aaPredicted RBP4.65□□□□□ -1.67
SKP1-208ENST00000521216 ZNF790Q6PG37 636 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 LGI2Q8N0V4 545 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 ZNF611Q8N823 705 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 CAMKVQ8NCB2 501 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 PHLDA1Q8WV24 401 aaPredicted RBP4.65□□□□□ -1.67
SKP1-208ENST00000521216 ROBO4Q8WZ75 1007 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 NR4A3Q92570 626 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 FNBP1Q96RU3 617 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 FEVQ99581 238 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 NAA11Q9BSU3 229 aaPredicted RBP4.65□□□□□ -1.67
SKP1-208ENST00000521216 PRRG4Q9BZD6 226 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 FAM129AQ9BZQ8 928 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 ZNF696Q9H7X3 374 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 FGF21Q9NSA1 209 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 FLRT3Q9NZU0 649 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 CCL27Q9Y4X3 112 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 KIAA1210Q9ULL0 1709 aa4.65□□□□□ -1.67
SKP1-208ENST00000521216 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 ENO4A6NNW6 628 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 CLDN4O14493 209 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 CLPTM1O96005 669 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 CD22P20273 847 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 LHX1P48742 406 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 RAD23AP54725 363 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 SP3Q02447 781 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 TAF10Q12962 218 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 CUL3Q13618 768 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 SQLEQ14534 574 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 UGT3A2Q3SY77 523 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 ARHGAP11AQ6P4F7 1023 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 TLK2Q86UE8 772 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 NUDT13Q86X67 352 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 TRIM58Q8NG06 486 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 FAM76AQ8TAV0 307 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 SUSD6Q92537 303 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 SPSB1Q96BD6 273 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 GIMAP5Q96F15 307 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 ST6GALNAC4Q9H4F1 302 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 P4HTMQ9NXG6 502 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 TNNQ9UQP3 1299 aa4.64□□□□□ -1.67
SKP1-208ENST00000521216 PTGESO14684 152 aa4.63□□□□□ -1.67
SKP1-208ENST00000521216 IRF2P14316 349 aa4.63□□□□□ -1.67
SKP1-208ENST00000521216 CA6P23280 308 aa4.63□□□□□ -1.67
SKP1-208ENST00000521216 PTGER4P35408 488 aa4.63□□□□□ -1.67
SKP1-208ENST00000521216 NKX2-1P43699 371 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms