RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 LILRA5A6NI73 299 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 UBXN8O00124 270 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 MYO1CO00159 1063 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 CATP04040 527 aaKnown RBP14.86□□□□□ -0.03
LSM1-203ENST00000520755 TYRP1P17643 537 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 HPDP32754 393 aaPredicted RBP14.86□□□□□ -0.03
LSM1-203ENST00000520755 CCT5P48643 541 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 EPHA4P54764 986 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 SPIDRQ14159 915 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 TGFBIQ15582 683 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 ZXDCQ2QGD7 858 aaPredicted RBP14.86□□□□□ -0.03
LSM1-203ENST00000520755 KLC3Q6P597 504 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 USP53Q70EK8 1073 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 TBC1D21Q8IYX1 336 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 OR10G6Q8NH81 332 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 DENND1AQ8TEH3 1009 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 SCYL1Q96KG9 808 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 TSNARE1Q96NA8 513 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 FAM111AQ96PZ2 611 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 GFM1Q96RP9 751 aaKnown RBP14.86□□□□□ -0.03
LSM1-203ENST00000520755 MRPL57Q9BQC6 102 aaKnown RBP14.86□□□□□ -0.03
LSM1-203ENST00000520755 MRPL46Q9H2W6 279 aaKnown RBP14.86□□□□□ -0.03
LSM1-203ENST00000520755 KIR3DX1Q9H7L2 352 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 RDH14Q9HBH5 336 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 PARVBQ9HBI1 364 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 UTP6Q9NYH9 597 aaKnown RBP14.86□□□□□ -0.03
LSM1-203ENST00000520755 CPSF2Q9P2I0 782 aaKnown RBP14.86□□□□□ -0.03
LSM1-203ENST00000520755 GRID1Q9ULK0 1009 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 RNF112Q9ULX5 631 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 PLAGL1Q9UM63 463 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 SPTBN4Q9H254 2564 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 HEATR5BQ9P2D3 2071 aa14.86□□□□□ -0.03
LSM1-203ENST00000520755 CCDC189A1A4V9 331 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 G3V2L1 256 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 DUX1O43812 170 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 UBXN7O94888 489 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 RPN2P04844 631 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 ENO2P09104 434 aaPredicted RBP14.85□□□□□ -0.03
LSM1-203ENST00000520755 RBP1P09455 135 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 DHRS4L1P0CG22 281 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 AMD1P17707 334 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 CYP2A7P20853 494 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 CD1CP29017 333 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 KPNA2P52292 529 aaKnown RBP14.85□□□□□ -0.03
LSM1-203ENST00000520755 GPLD1P80108 840 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 FOXC1Q12948 553 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 PCLAFQ15004 111 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 HES3Q5TGS1 186 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 CHCHD4Q8N4Q1 142 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 LMNTD1Q8N9Z9 388 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 PDPRQ8NCN5 879 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 ARMC2Q8NEN0 867 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 OR52E1Q8NGJ3 308 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 WDR48Q8TAF3 677 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 STAG3L4Q8TBR4 150 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 ZFPM2Q8WW38 1151 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 ADAMTS14Q8WXS8 1223 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 PKP4Q99569 1192 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 SELENOSQ9BQE4 189 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 NUDT4Q9NZJ9 180 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 POLG2Q9UHN1 485 aa14.85□□□□□ -0.03
LSM1-203ENST00000520755 NCF1BA6NI72 391 aaPredicted RBP14.84□□□□□ -0.03
LSM1-203ENST00000520755 A8MT66 165 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 NCF1CA8MVU1 366 aaPredicted RBP14.84□□□□□ -0.03
LSM1-203ENST00000520755 SUPT3HB4E1H0 165 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 D6RAR5 112 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 NTN3O00634 580 aaPredicted RBP14.84□□□□□ -0.03
LSM1-203ENST00000520755 TM9SF1O15321 606 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 KLK8O60259 260 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 SUPT3HO75486 399 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 CPNE6O95741 557 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 PROS1P07225 676 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 ERGP11308 486 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 NCF1P14598 390 aaPredicted RBP14.84□□□□□ -0.03
LSM1-203ENST00000520755 IMPA1P29218 277 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 CSF2RBP32927 897 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 SLC18A1P54219 525 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 WDR4P57081 412 aaKnown RBP14.84□□□□□ -0.03
LSM1-203ENST00000520755 PPP2R2AP63151 447 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 CDKL1Q00532 357 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 C18orf21Q32NC0 220 aaPredicted RBP14.84□□□□□ -0.03
LSM1-203ENST00000520755 CCDC153Q494R4 210 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 TTC23LQ6PF05 361 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 RBM44Q6ZP01 1051 aaKnown RBP14.84□□□□□ -0.03
LSM1-203ENST00000520755 FRA10AC1Q70Z53 315 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 GPSM1Q86YR5 675 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 OR4E2Q8NGC2 313 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 LCN9Q8WX39 176 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 NCSTNQ92542 709 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 RSC1A1Q92681 617 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 IL17FQ96PD4 163 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 NUDT22Q9BRQ3 303 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 TMEM79Q9BSE2 394 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 IQCGQ9H095 443 aaKnown RBP14.84□□□□□ -0.03
LSM1-203ENST00000520755 XKR8Q9H6D3 395 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 MLXIPLQ9NP71 852 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 KCNK9Q9NPC2 374 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 FAM53CQ9NYF3 392 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 OGFRQ9NZT2 677 aa14.84□□□□□ -0.03
LSM1-203ENST00000520755 ICKQ9UPZ9 632 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms