RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 WDR55Q9H6Y2 383 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 BIN3Q9NQY0 253 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 HPF1Q9NWY4 346 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 NKX1-2Q9UD57 310 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 ADGRE2Q9UHX3 823 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 HSPB11Q9Y547 144 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 WASF2Q9Y6W5 498 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 RIIAD1A6NNX1 92 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 KCNU1A8MYU2 1149 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 TBX10O75333 385 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 MAPK14Q16539 360 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PPM1JQ5JR12 505 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 AADACL4Q5VUY2 407 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 DRICH1Q6PGQ1 229 aaPredicted RBP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 FAM92BQ6ZTR7 304 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 C11orf65Q8NCR3 313 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 THRSPQ92748 146 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 GPR21Q99679 349 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 COPS4Q9BT78 406 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 MAGEH1Q9H213 219 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 UBQLN2Q9UHD9 624 aa11.89□□□□□ -0.51
ERGIC1-208ENST00000520399 PTPRJQ12913 1337 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 RPTORQ8N122 1335 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 INSIG1O15503 277 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 ICMTO60725 284 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PSMD8P48556 350 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 E2F2Q14209 437 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 MPP7Q5T2T1 576 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 C17orf64Q86WR6 236 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 SLITRK4Q8IW52 837 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 SLC34A3Q8N130 599 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 UBR7Q8N806 425 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 NOX1Q9Y5S8 564 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 SLC38A8A6NNN8 435 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PLK4O00444 970 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 AKAP8O43823 692 aaKnown RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 ERAL1O75616 437 aaKnown RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 MATN4O95460 622 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 GOT2P00505 430 aaKnown RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 NMBRP28336 390 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 GNPDA1P46926 289 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 NDUFV1P49821 464 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 DAOAP59103 153 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 LILRA4P59901 499 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PCDH1Q08174 1060 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 LAPTM5Q13571 262 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 XKR4Q5GH76 650 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 TSTD2Q5T7W7 516 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 OR2T12Q8NG77 320 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 TCTEX1D2Q8WW35 142 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 C12orf42Q96LP6 360 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 SCGB3A2Q96PL1 93 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 GTF2IRD1Q9UHL9 959 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PRSS44E7EML9 344 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 MID1O15344 667 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 SGCEO43556 437 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 MANFP55145 182 aaKnown RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 ADAM8P78325 824 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 FAM124AQ86V42 546 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 GRAMD2AQ8IUY3 354 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PHYKPLQ8IUZ5 450 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 FAM109AQ8N4B1 249 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 C1GALT1C1Q96EU7 318 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 SEZ6LQ9BYH1 1024 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 RC3H2Q9HBD1 1191 aaKnown RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 EIF3KQ9UBQ5 218 aaKnown RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 CDH22Q9UJ99 828 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 ABCC6O95255 1503 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PRAMEF33A0A0G2JMD5 474 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PSMD9O00233 223 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PRAMEF10O60809 474 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 CLDN9O95484 217 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 EOMESO95936 686 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 UNGP13051 313 aaPredicted RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 KELP23276 732 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 IL10RBQ08334 325 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF155Q12901 538 aaPredicted RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 SP140Q13342 867 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 GTF2H2Q13888 395 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 TLR1Q15399 786 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 MTX3Q5HYI7 312 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 GTF2H2CQ6P1K8 395 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 CERS6Q6ZMG9 384 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 ZNF730Q6ZMV8 503 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 BEND7Q8N7W2 519 aaPredicted RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 CD99L2Q8TCZ2 262 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 ING5Q8WYH8 240 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 AASSQ9UDR5 926 aa11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
ERGIC1-208ENST00000520399 PER2O15055 1255 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 GMDSO60547 372 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 LMO2P25791 158 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 TMPRSS11BQ86T26 416 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 TREML1Q86YW5 311 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 NIPA2Q8N8Q9 360 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 PCDH19Q8TAB3 1148 aa11.87□□□□□ -0.51
ERGIC1-208ENST00000520399 FZD8Q9H461 694 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms