RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MTCP1P56278 107 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 TEFQ10587 303 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 TAZQ16635 292 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 CA9Q16790 459 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 CCDC92Q53HC0 331 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 CCDC158Q5M9N0 1113 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 FAM171BQ6P995 826 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 NHLRC1Q6VVB1 395 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 CREB3L2Q70SY1 520 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 PIWIL4Q7Z3Z4 852 aaKnown RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZSCAN30Q86W11 494 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 CRYBG2Q8N1P7 616 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 ARL10Q8N8L6 244 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 RASGEF1AQ8N9B8 481 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 THAP8Q8NA92 274 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 UXS1Q8NBZ7 420 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 OR13J1Q8NGT2 312 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 FGFBP3Q8TAT2 258 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 IRGQQ8WZA9 623 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 KRT35Q92764 455 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 PROX1Q92786 737 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 CCDC47Q96A33 483 aaKnown RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 BSCL2Q96G97 398 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 PDLIM5Q96HC4 596 aaKnown RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 FCRL4Q96PJ5 515 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 Q9H8V8 135 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 TCF7L2Q9NQB0 619 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 OLFML3Q9NRN5 406 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 IARS2Q9NSE4 1012 aaKnown RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 CWC25Q9NXE8 425 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 SLCO1C1Q9NYB5 712 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 GPRASP1Q5JY77 1395 aa4.99□□□□□ -1.61
HMGB1P46-201ENST00000520062 A0A1W2PRV1 198 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 E9PI62 339 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 ST8SIA3O43173 380 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 PPIP5K2O43314 1243 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 SYNGR3O43761 229 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 ATP6AP2O75787 350 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 SLC16A8O95907 504 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 SNRNP70P08621 437 aaKnown RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 TNFRSF8P28908 595 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 IL15P40933 162 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 CDX1P47902 265 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 KCNJ1P48048 391 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 THOP1P52888 689 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 RPL24P83731 157 aaKnown RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 ACTN3Q08043 901 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 AP1B1Q10567 949 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 KIF5AQ12840 1032 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZBTB17Q13105 803 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 VEZF1Q14119 521 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 SF3B4Q15427 424 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 PTGISQ16647 500 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 UGT3A2Q3SY77 523 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 LACTB2Q53H82 288 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 LBHQ53QV2 105 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 FOXP4Q8IVH2 680 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 CFAP206Q8IYR0 622 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZNF441Q8N8Z8 693 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 OR8H1Q8NGG4 311 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 LILRB1Q8NHL6 650 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 PSMA8Q8TAA3 256 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 RTP4Q96DX8 246 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 HNRNPABQ99729 332 aaKnown RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 PANK2Q9BZ23 570 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 GSN-AS1Q9NRJ2 163 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 FBXL5Q9UKA1 691 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 RALYQ9UKM9 306 aaKnown RBP4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 ACAD8Q9UKU7 415 aa4.98□□□□□ -1.61
HMGB1P46-201ENST00000520062 CKAP5Q14008 2032 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 IGHV4OR15-8A0A075B7B6 117 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 A0A1W2PPI3 338 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 ASPDHA6ND91 283 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 CASTOR2A6NHX0 329 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 PLOD2O00469 737 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 FLRT2O43155 660 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 PLGP00747 810 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 GH1P01241 217 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 MT-ND3P03897 115 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 ACAA1P09110 424 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 UROSP10746 265 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 HSPA8P11142 646 aaKnown RBP4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 EPORP19235 508 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 ARF5P84085 180 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 LTBQ06643 244 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 ILF2Q12905 390 aaKnown RBP4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 KIR2DS3Q14952 304 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 CTU2Q2VPK5 515 aaKnown RBP4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 ZNF260Q3ZCT1 412 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 CYP4A22Q5TCH4 519 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 LCE5AQ5TCM9 118 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 IRAK1BP1Q5VVH5 260 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 ALKBH5Q6P6C2 394 aaKnown RBP4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 AMER3Q8N944 861 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 SPATA20Q8TB22 786 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 SEPT1Q8WYJ6 367 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 ATP6V0A1Q93050 837 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 P2RX5Q93086 422 aa4.97□□□□□ -1.61
HMGB1P46-201ENST00000520062 C17orf77Q96MU5 243 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms