RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 RPL10P27635 214 aaKnown RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 AVPR2P30518 371 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 RPS9P46781 194 aaKnown RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 RABIFP47224 123 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 RASSF2P50749 326 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 CORO7P57737 925 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 ACTN3Q08043 901 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 TMEM198Q66K66 360 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 THOC6Q86W42 341 aaKnown RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 SYTL1Q8IYJ3 562 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 FAM160A2Q8N612 972 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 OR1E3Q8WZA6 343 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 SNX19Q92543 992 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 RAD51AP1Q96B01 352 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 TUBGCP3Q96CW5 907 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 FAM122AQ96E09 287 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 PTCD3Q96EY7 689 aaKnown RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 MED8Q96G25 268 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 MAGEB10Q96LZ2 347 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 C3orf30Q96M34 536 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 SLC29A3Q9BZD2 475 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 TUBB1Q9H4B7 451 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 RIC8BQ9NVN3 520 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 KLQ9UEF7 1012 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 G3BP2Q9UN86 482 aaKnown RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 ST14Q9Y5Y6 855 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 ZFHX2Q9C0A1 2572 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 PTPRZ1P23471 2315 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 PLXND1Q9Y4D7 1925 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 PDZK1P1A8MUH7 402 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 UBDO15205 165 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 SLC22A2O15244 555 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 NDUFS2O75306 463 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 KLF10Q13118 480 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 MTAPQ13126 283 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 XKR7Q5GH72 579 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 TCHHL1Q5QJ38 904 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 TPRG1LQ5T0D9 272 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 CAPRIN2Q6IMN6 1127 aaKnown RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 IL27RAQ6UWB1 636 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 Q6ZSR6 202 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 CHSY3Q70JA7 882 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 LARP4Q71RC2 724 aaKnown RBP eCLIP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 RD3Q7Z3Z2 195 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 ABI3BPQ7Z7G0 1075 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 CAMKK1Q8N5S9 505 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 OR5AR1Q8NGP9 310 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 OR56A3Q8NH54 315 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 OR5K2Q8NHB8 316 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 ZNF480Q8WV37 535 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 KLHL29Q96CT2 875 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 MARK4Q96L34 752 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 TRIT1Q9H3H1 467 aaKnown RBP12.03□□□□□ -0.48
SPIDR-209ENST00000519141 ZNF385DQ9H6B1 395 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 AKTIPQ9H8T0 292 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 POLG2Q9UHN1 485 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 TAGLN3Q9UI15 199 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 RNF11Q9Y3C5 154 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 SIT1Q9Y3P8 196 aa12.03□□□□□ -0.48
SPIDR-209ENST00000519141 PRR19A6NJB7 356 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 FFAR3O14843 346 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 SCAMP1O15126 338 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 GPR42O15529 346 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 DNAJC8O75937 253 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-209ENST00000519141 ADSLP30566 484 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-209ENST00000519141 PXNP49023 591 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-209ENST00000519141 HTR6P50406 440 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 TBPL1P62380 186 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 LRP8Q14114 963 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 GGTA1PQ4G0N0 100 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 CAPN13Q6MZZ7 669 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-209ENST00000519141 CPSF7Q8N684 471 aaKnown RBP12.02□□□□□ -0.49
SPIDR-209ENST00000519141 FRMD1Q8N878 549 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 PPFIBP2Q8ND30 876 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 PHC3Q8NDX5 983 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 OR13H1Q8NG92 308 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 C12orf66Q96MD2 445 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 PCED1AQ9H1Q7 454 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 LRMDAQ9H2I8 198 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 INTS7Q9NVH2 962 aaKnown RBP12.02□□□□□ -0.49
SPIDR-209ENST00000519141 LNPEPQ9UIQ6 1025 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 TDRKHQ9Y2W6 561 aaKnown RBP12.02□□□□□ -0.49
SPIDR-209ENST00000519141 PLEKHM1Q9Y4G2 1056 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 COPG1Q9Y678 874 aaKnown RBP12.02□□□□□ -0.49
SPIDR-209ENST00000519141 CACNA1IQ9P0X4 2223 aa12.02□□□□□ -0.49
SPIDR-209ENST00000519141 A0A1W2PPC4 97 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 CLGNO14967 610 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 UGDHO60701 494 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 KRT6AP02538 564 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 KRT6BP04259 564 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 EZRP15311 586 aaKnown RBP12.01□□□□□ -0.49
SPIDR-209ENST00000519141 LBPP18428 481 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 PIK3R1P27986 724 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 PRDX6P30041 224 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 HALP42357 657 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 KRT6CP48668 564 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 PNLIPRP1P54315 467 aa12.01□□□□□ -0.49
SPIDR-209ENST00000519141 SRP54P61011 504 aaKnown RBP12.01□□□□□ -0.49
SPIDR-209ENST00000519141 STX1BP61266 288 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms