RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 Q6ZSR6 202 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CHSY3Q70JA7 882 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 LARP4Q71RC2 724 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 RD3Q7Z3Z2 195 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 RAB42Q8N4Z0 105 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CPSF7Q8N684 471 aaKnown RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PHC3Q8NDX5 983 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 OR5AR1Q8NGP9 310 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 OR56A3Q8NH54 315 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 FAM174AQ8TBP5 190 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ZNF480Q8WV37 535 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 RLN3Q8WXF3 142 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 SNX19Q92543 992 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TSACCQ96A04 125 aaPredicted RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CMTM5Q96DZ9 223 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PTCD3Q96EY7 689 aaKnown RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PDXPQ96GD0 296 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 MARK4Q96L34 752 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 C3orf30Q96M34 536 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 FERD3LQ96RJ6 166 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 IER2Q9BTL4 223 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PCED1AQ9H1Q7 454 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TUBB1Q9H4B7 451 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ZNF385DQ9H6B1 395 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 EBF2Q9HAK2 575 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 INTS7Q9NVH2 962 aaKnown RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 GPRC5BQ9NZH0 403 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 POLG2Q9UHN1 485 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TAGLN3Q9UI15 199 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 LNPEPQ9UIQ6 1025 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TDRKHQ9Y2W6 561 aaKnown RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 RNF11Q9Y3C5 154 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PLEKHM1Q9Y4G2 1056 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PTGDR2Q9Y5Y4 395 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ST14Q9Y5Y6 855 aa7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CFAP20Q9Y6A4 193 aaKnown RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TP53BP1Q12888 1972 aaPredicted RBP7.42□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TDRD6O60522 2096 aaKnown RBP7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 A0A1W2PPC4 97 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CFAP73A6NFT4 308 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PRR19A6NJB7 356 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ZNF839A8K0R7 811 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 SLC28A1O00337 649 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 MANBAO00462 879 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 FFAR3O14843 346 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 SCAMP1O15126 338 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 GPR42O15529 346 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PI15O43692 258 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 UGDHO60701 494 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ULK1O75385 1050 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 RASGRP1O95267 797 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 DCNP07585 359 aaKnown RBP7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 THEGLP0DJG4 465 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 GNAZP19086 355 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CCND1P24385 295 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PIK3R1P27986 724 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PRDX6P30041 224 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PXNP49023 591 aaPredicted RBP7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 HTR6P50406 440 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ATP4BP51164 291 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 MNAT1P51948 309 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 SRP54P61011 504 aaKnown RBP7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 STX1BP61266 288 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TBPL1P62380 186 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 IRX1P78414 480 aaPredicted RBP7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CHIT1Q13231 466 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PRKG2Q13237 762 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TSTA3Q13630 321 aaPredicted RBP7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 LRP8Q14114 963 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 GRB7Q14451 532 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 KRT33BQ14525 404 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ARHGAP19Q14CB8 494 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 NAA25Q14CX7 972 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CPSF6Q16630 551 aaKnown RBP eCLIP7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 IMPG1Q17R60 797 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ALG11Q2TAA5 492 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 UAP1L1Q3KQV9 507 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 ATP6AP1LQ52LC2 224 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 XKR7Q5GH72 579 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 XKR6Q5GH73 641 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TPRG1LQ5T0D9 272 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 LIPJQ5W064 366 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 DUS1LQ6P1R4 473 aaKnown RBP7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 SCIMPQ6UWF3 145 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 RNF165Q6ZSG1 346 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 SPATA19Q7Z5L4 167 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 HID1Q8IV36 788 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 TBC1D21Q8IYX1 336 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 FRMD1Q8N878 549 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 L3MBTL4Q8NA19 623 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 PPFIBP2Q8ND30 876 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 CADM4Q8NFZ8 388 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 OR13H1Q8NG92 308 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 OR5K2Q8NHB8 316 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 SPACA7Q96KW9 195 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 C12orf66Q96MD2 445 aa7.41□□□□□ -1.22
SCARNA20.1-201ENST00000516009 INSM2Q96T92 566 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms