RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 CCND1P24385 295 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ATP5F1P24539 256 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ACP1P24666 158 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 PKLRP30613 574 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 RPA3P35244 121 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 BDKRB1P46663 353 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ALDH18A1P54886 795 aaKnown RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 MAZP56270 477 aaKnown RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 NAA20P61599 178 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 MPP2Q14168 576 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 KRT33BQ14525 404 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 SETDB1Q15047 1291 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 CLPPQ16740 277 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 CCSMST1Q4G0I0 132 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 STPG1Q5TH74 334 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 SULT1C3Q6IMI6 304 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ZYG11AQ6WRX3 759 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 PIP4P1Q86T03 277 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 NAXDQ8IW45 347 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 LRRC56Q8IYG6 542 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 OR2L8Q8NGY9 312 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 OR56A3Q8NH54 315 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ZNF480Q8WV37 535 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 SCYL1Q96KG9 808 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 PKP4Q99569 1192 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 HGH1Q9BTY7 390 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 UNKQ9C0B0 810 aaKnown RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 RAB33BQ9H082 229 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ARL15Q9NXU5 204 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 SIRPGQ9P1W8 387 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 STOX2Q9P2F5 926 aaPredicted RBP11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 COPG2Q9UBF2 871 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 LNPEPQ9UIQ6 1025 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 ICKQ9UPZ9 632 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
PDLIM5-220ENST00000514830 DNAH14Q0VDD8 3507 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 TMEM120BA0PK00 339 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 PCNX2A6NKB5 2137 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 C4orf47A7E2U8 309 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 G3V2L1 256 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 MATN2O00339 956 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 SLC30A4O14863 429 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 BIRC5O15392 142 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 SMIM24O75264 130 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 SNRNP200O75643 2136 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 FKBP9O95302 570 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 S100BP04271 92 aaPredicted RBP11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 IMPA1P29218 277 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 SLC6A12P48065 614 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 PRKAA2P54646 552 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 DNAJB13P59910 316 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 GPLD1P80108 840 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 C16orf46Q6P387 395 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 KLHL35Q6PF15 583 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 AGTRAPQ6RW13 159 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 GLRX5Q86SX6 157 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 AMIGO1Q86WK6 493 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 SLC22A9Q8IVM8 553 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 LCN9Q8WX39 176 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 FAM111AQ96PZ2 611 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 CDC6Q99741 560 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 SGPP1Q9BX95 441 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 CNOT10Q9H9A5 744 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 SLC17A7Q9P2U7 560 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 LRIT1Q9P2V4 623 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 EPHA6Q9UF33 1036 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 TSR3Q9UJK0 312 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 TDRKHQ9Y2W6 561 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 TNPO3Q9Y5L0 923 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 ENTPD2Q9Y5L3 495 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 RNF215Q9Y6U7 377 aa11.61□□□□□ -0.55
PDLIM5-220ENST00000514830 CNOT1A5YKK6 2376 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 HEATR5BQ9P2D3 2071 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 COL27A1Q8IZC6 1860 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 TRBV23OR9-2A0A075B6M9 112 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PRAMEF33A0A0G2JMD5 474 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 RHPN2P1A8MT19 583 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 SUPT3HB4E1H0 165 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 E7ENX8 843 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 UBXN8O00124 270 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PRICKLE3O43900 615 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 DLX3O60479 287 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 SUPT3HO75486 399 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 LDOC1O95751 146 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 MYL2P10916 166 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 CPA3P15088 417 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 CKMT2P17540 419 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PNLIPRP1P54315 467 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PPP2R2AP63151 447 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 TAP2Q03519 686 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PCDH1Q08174 1060 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PRKG2Q13237 762 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 ILKQ13418 452 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 KIR2DS3Q14952 304 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PCLAFQ15004 111 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PCBP2Q15366 365 aaKnown RBP eCLIP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 ZXDCQ2QGD7 858 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 ADGRF3Q8IZF5 1079 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 CARFQ8N187 725 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms