RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 MVB12BQ9H7P6 319 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 RDH14Q9HBH5 336 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 SLCO1B3Q9NPD5 702 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 LATS2Q9NRM7 1088 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 SNX15Q9NRS6 342 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 IARS2Q9NSE4 1012 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 IMP3Q9NV31 184 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 PCMTD2Q9NV79 361 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 INTS10Q9NVR2 710 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 FBXO5Q9UKT4 447 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 CRYL1Q9Y2S2 319 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 MTO1Q9Y2Z2 717 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 CFAP20Q9Y6A4 193 aaKnown RBP8.1□□□□□ -1.11
CCL28-204ENST00000514421 AK5Q9Y6K8 562 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 USH1CQ9Y6N9 552 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 SCN8AQ9UQD0 1980 aa8.1□□□□□ -1.11
CCL28-204ENST00000514421 APC2O95996 2303 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 CCDC187A0A096LP49 1063 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 IGHV5-10-1A0A0J9YXX1 117 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 C1QTNF9BB2RNN3 333 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 TARM1B6A8C7 271 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 MYO1CO00159 1063 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 HAUS5O94927 633 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 SLCO2B1O94956 709 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 WISP3O95389 354 aaPredicted RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 APOA4P06727 396 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 PROS1P07225 676 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 C1QTNF9P0C862 333 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 TYRP1P17643 537 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 GRK2P25098 689 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 ACADLP28330 430 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 TYK2P29597 1187 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 SLC26A3P40879 764 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 MAPK9P45984 424 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 PREPP48147 710 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 ACTN3Q08043 901 aaPredicted RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 CYP4F3Q08477 520 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 BOP1Q14137 746 aaKnown RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 SYTL3Q4VX76 610 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 ZNF789Q5FWF6 425 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 CTSL3PQ5NE16 218 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 PLEKHS1Q5SXH7 462 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 PHF19Q5T6S3 580 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 CES4AQ5XG92 561 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 FAM91A1Q658Y4 838 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 ATG16L1Q676U5 607 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 ZNF470Q6ECI4 717 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 KLHL35Q6PF15 583 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 UNQ6494/PRO21346Q6UXR6 183 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 NAPRTQ6XQN6 538 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 CCDC121Q6ZUS5 278 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 TMPRSS9Q7Z410 1059 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 B3GNT8Q7Z7M8 397 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 PDZD3Q86UT5 571 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 DENND6AQ8IWF6 608 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 FBXO39Q8N4B4 442 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 TMEM151AQ8N4L1 468 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 CCDC63Q8NA47 563 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 KDF1Q8NAX2 398 aaPredicted RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 PHC3Q8NDX5 983 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 RDH11Q8TC12 318 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 STON2Q8WXE9 905 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 RNF166Q96A37 237 aaPredicted RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 ZDHHC12Q96GR4 267 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 LIN37Q96GY3 246 aaPredicted RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 RMDN2Q96LZ7 410 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 NUDT22Q9BRQ3 303 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 SIKE1Q9BRV8 207 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 CCDC68Q9H2F9 335 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 SEMA6CQ9H3T2 930 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 TFB2MQ9H5Q4 396 aaKnown RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 CCDC86Q9H6F5 360 aaKnown RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 POLR1BQ9H9Y6 1135 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 IL1RAPL1Q9NZN1 696 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 AKAP7Q9P0M2 348 aaPredicted RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 KLHL42Q9P2K6 505 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 DKK4Q9UBT3 224 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 EPHA6Q9UF33 1036 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 CORO1CQ9ULV4 474 aaPredicted RBP8.09□□□□□ -1.11
CCL28-204ENST00000514421 COMMD10Q9Y6G5 202 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 LRP4O75096 1905 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 AHCTF1Q8WYP5 2266 aa8.09□□□□□ -1.11
CCL28-204ENST00000514421 A0A096LPK6 155 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 TMEM8BA6NDV4 472 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 G3V2L1 256 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 PLD2O14939 933 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 HGSO14964 777 aaPredicted RBP8.08□□□□□ -1.12
CCL28-204ENST00000514421 TOX3O15405 576 aaPredicted RBP8.08□□□□□ -1.12
CCL28-204ENST00000514421 DCTN3O75935 186 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 DNAJC8O75937 253 aaPredicted RBP8.08□□□□□ -1.12
CCL28-204ENST00000514421 CAPNS1P04632 268 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 C2P06681 752 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 SLC35E2BP0CK96 405 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 TROVE2P10155 538 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCL28-204ENST00000514421 FGF3P11487 239 aaPredicted RBP8.08□□□□□ -1.12
CCL28-204ENST00000514421 MPSTP25325 297 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 CRABP2P29373 138 aa8.08□□□□□ -1.12
CCL28-204ENST00000514421 RBMS1P29558 406 aaKnown RBP8.08□□□□□ -1.12
CCL28-204ENST00000514421 CSTF2P33240 577 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCL28-204ENST00000514421 SLC1A2P43004 574 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms