RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ASF1AQ9Y294 204 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 ZNF835Q9Y2P0 537 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 MEMO1Q9Y316 297 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 BZW2Q9Y6E2 419 aaKnown RBP10.47□□□□□ -0.73
DDX41-216ENST00000513562 ZNF469Q96JG9 3925 aaPredicted RBP10.47□□□□□ -0.73
DDX41-216ENST00000513562 NUP210LQ5VU65 1888 aa10.47□□□□□ -0.73
DDX41-216ENST00000513562 NSG1A0A0A6YYJ2 146 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 FAM221AA4D161 298 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 C2orf81A6NN90 581 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 ISM1B1AKI9 464 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 BMP10O95393 424 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 WDPCPO95876 746 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 F10P00742 488 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 GSTM1P09488 218 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 CD99P14209 185 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 ITGALP20701 1170 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 MCM3P25205 808 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 ACADLP28330 430 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 NSG1P42857 185 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 GSTM4Q03013 218 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 CACNG1Q06432 222 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 KLC1Q07866 573 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 MPP3Q13368 585 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 GRM7Q14831 915 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 LONRF1Q17RB8 773 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 TCTE1Q5JU00 501 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 HIBCHQ6NVY1 386 aaPredicted RBP10.46□□□□□ -0.73
DDX41-216ENST00000513562 MEX3BQ6ZN04 569 aaKnown RBP10.46□□□□□ -0.73
DDX41-216ENST00000513562 NDUFAF7Q7L592 441 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 TBC1D21Q8IYX1 336 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 METTL27Q8N6F8 245 aaPredicted RBP10.46□□□□□ -0.73
DDX41-216ENST00000513562 SIRT6Q8N6T7 355 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 OR5K2Q8NHB8 316 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 STT3BQ8TCJ2 826 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 THAP3Q8WTV1 239 aaPredicted RBP10.46□□□□□ -0.73
DDX41-216ENST00000513562 TFB1MQ8WVM0 346 aaKnown RBP10.46□□□□□ -0.73
DDX41-216ENST00000513562 MAGED4Q96JG8 741 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 ZNF285Q96NJ3 590 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 FSD1LQ9BXM9 530 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 MAK16Q9BXY0 300 aaKnown RBP10.46□□□□□ -0.73
DDX41-216ENST00000513562 GPAMQ9HCL2 828 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 CTTNBP2NLQ9P2B4 639 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 UVRAGQ9P2Y5 699 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 POLG2Q9UHN1 485 aa10.46□□□□□ -0.73
DDX41-216ENST00000513562 FITM1A5D6W6 292 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 C5orf60A6NFR6 353 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 PRAMEF2O60811 474 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 FAM155BO75949 473 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 ZGLP1P0C6A0 271 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 NR2C2P49116 596 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 DYNLT1P63172 113 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 PMP22Q01453 160 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 FIGNQ5HY92 759 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 ALKBH5Q6P6C2 394 aaKnown RBP10.45□□□□□ -0.74
DDX41-216ENST00000513562 CNSTQ6PJW8 725 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 RIPOR1Q6ZS17 1223 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 SNX20Q7Z614 316 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 RFX6Q8HWS3 928 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 ZNF567Q8N184 647 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 DTWD1Q8N5C7 304 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 TTC29Q8NA56 475 aaPredicted RBP10.45□□□□□ -0.74
DDX41-216ENST00000513562 OR13C4Q8NGS5 318 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 SUN3Q8TAQ9 357 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 SYN2Q92777 582 aaPredicted RBP10.45□□□□□ -0.74
DDX41-216ENST00000513562 MIEF2Q96C03 454 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 FICDQ9BVA6 458 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 FAM96AQ9H5X1 160 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 ZDHHC3Q9NYG2 299 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 KLHL8Q9P2G9 620 aaPredicted RBP10.45□□□□□ -0.74
DDX41-216ENST00000513562 C3orf18Q9UK00 162 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 PLAGL1Q9UM63 463 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 NENFQ9UMX5 172 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 KLHL20Q9Y2M5 609 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 TDRKHQ9Y2W6 561 aaKnown RBP10.45□□□□□ -0.74
DDX41-216ENST00000513562 MAU2Q9Y6X3 613 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 ANKHD1Q8IWZ3 2542 aaKnown RBP10.45□□□□□ -0.74
DDX41-216ENST00000513562 SEC16AO15027 2179 aa10.45□□□□□ -0.74
DDX41-216ENST00000513562 IGLV3-12A0A075B6K2 115 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 TRBV5-4A0A0C4DH59 114 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 OR5H15A6NDH6 313 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 LIN7AO14910 233 aaPredicted RBP10.44□□□□□ -0.74
DDX41-216ENST00000513562 ZRANB2O95218 330 aaKnown RBP eCLIP10.44□□□□□ -0.74
DDX41-216ENST00000513562 MED26O95402 600 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 AP2A1O95782 977 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 AGTP01019 485 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 SERPING1P05155 500 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 CELA2AP08217 269 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 MYBL2P10244 700 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 ACRV1P26436 265 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 PKLRP30613 574 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 RAB28P51157 221 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 ZNF140P52738 457 aaPredicted RBP10.44□□□□□ -0.74
DDX41-216ENST00000513562 OCA2Q04671 838 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 STX1AQ16623 288 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 FAM214AQ32MH5 1076 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 GPR33Q49SQ1 333 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 NCCRP1Q6ZVX7 275 aaPredicted RBP10.44□□□□□ -0.74
DDX41-216ENST00000513562 BZW1Q7L1Q6 419 aaKnown RBP10.44□□□□□ -0.74
DDX41-216ENST00000513562 ZGRF1Q86YA3 2104 aa10.44□□□□□ -0.74
DDX41-216ENST00000513562 SPPL2CQ8IUH8 684 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms