RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RPS6KL1Q9Y6S9 549 aa3.63□□□□□ -1.83
PDLIM5-218ENST00000513341 CHD5Q8TDI0 1954 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 IGHV1OR21-1A0A087WYE8 117 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CFAP69A5D8W1 941 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 GOLGA6L3A6NEY3 463 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 ZSCAN5CA6NGD5 496 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CCDC154A6NI56 674 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 TARM1B6A8C7 271 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 C21orf140B9A014 251 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 PRSS44E7EML9 344 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 MYO1FO00160 1098 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 PDXKO00764 312 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SPTLC2O15270 562 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 TOX3O15405 576 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 LRRTM2O43300 516 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SMAD6O43541 496 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF821O75541 412 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 STK17BO94768 372 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 POP4O95707 220 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SCGB1D2O95969 90 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 HLA-DRAP01903 254 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 TUBB4AP04350 444 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 FYNP06241 537 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 VDRP11473 427 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CD99P14209 185 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CD58P19256 250 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 F8A1P23610 371 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC6A2P23975 617 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SSTR2P30874 369 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 GTF2H1P32780 548 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 RPL34P49207 117 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CASP4P49662 377 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 OR1D5P58170 312 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 YWHAEP62258 255 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF235Q14590 738 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 IL11RAQ14626 422 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 NFATC4Q14934 902 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 RAB39AQ14964 217 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CNGA2Q16280 664 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 AMZ1Q400G9 498 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 MINDY4Q4G0A6 757 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF805Q5CZA5 627 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 RAP1GAP2Q684P5 730 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SPECC1LQ69YQ0 1117 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SPOPLQ6IQ16 392 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 FBXL22Q6P050 247 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CYB5D1Q6P9G0 228 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 LCLAT1Q6UWP7 414 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 IGFL3Q6UXB1 125 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF783Q6ZMS7 281 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 Q6ZVL8 140 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 INTS8Q75QN2 995 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC47A2Q86VL8 602 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CHSY1Q86X52 802 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 MMP21Q8N119 569 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 KRT78Q8N1N4 520 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 MYO1HQ8N1T3 1032 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 PQLC1Q8N2U9 271 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 PRR18Q8N4B5 295 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 ST6GALNAC3Q8NDV1 305 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 DQX1Q8TE96 717 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 NDRG1Q92597 394 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 SNRNP40Q96DI7 357 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 NUDT22Q9BRQ3 303 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 TWSG1Q9GZX9 223 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 RETREG1Q9H6L5 497 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 DMRT3Q9NQL9 472 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 MBNL1Q9NR56 388 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 CISHQ9NSE2 258 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 TRNAU1APQ9NX07 287 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 KLQ9UEF7 1012 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 PADI1Q9ULC6 663 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 MORC2Q9Y6X9 1032 aaPredicted RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 LRP4O75096 1905 aa3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 TNRC6AQ8NDV7 1962 aaKnown RBP3.62□□□□□ -1.83
PDLIM5-218ENST00000513341 DCHS2Q6V1P9 2916 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 FER1L5A0AVI2 2057 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 PVALEFA0A1B0GWK0 134 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 ILVBLA1L0T0 632 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 A6NCN8 305 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 H3BQV1 296 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 K7ERQ8 282 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 TULP2O00295 520 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 CACNB4O00305 520 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 DIAPH2O60879 1101 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 TRUB2O95900 331 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 MOCS2O96007 188 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 IGLV3-25P01717 112 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 FGF1P05230 155 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 PAEPP09466 180 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 CCNB1P14635 433 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 LPOP22079 712 aaPredicted RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 CCR1P32246 355 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 TRIM23P36406 574 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 GARSP41250 739 aaKnown RBP3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 STAT6P42226 847 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 PIK3CAP42336 1068 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 ACADSBP45954 432 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 FASLGP48023 281 aa3.61□□□□□ -1.83
PDLIM5-218ENST00000513341 CCL11P51671 97 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms