RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SECISBP2LQ93073 1101 aaKnown RBP4.08□□□□□ -1.76
HTT-210ENST00000512909 PPP1R13BQ96KQ4 1090 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 KCNN2Q9H2S1 579 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 RETREG1Q9H6L5 497 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 PLSCR4Q9NRQ2 329 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 LARSQ9P2J5 1176 aaKnown RBP4.08□□□□□ -1.76
HTT-210ENST00000512909 DDX25Q9UHL0 483 aaKnown RBP4.08□□□□□ -1.76
HTT-210ENST00000512909 STX8Q9UNK0 236 aa4.08□□□□□ -1.76
HTT-210ENST00000512909 CKAP5Q14008 2032 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 CASP8AP2Q9UKL3 1982 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 TMEM8BA6NDV4 472 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 FAM90A26D6RGX4 464 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 F5H6K3 240 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 J3QR06 171 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 MID1O15344 667 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 ZNHIT1O43257 154 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 PLPP2O43688 288 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 PLOD3O60568 738 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 WDR1O75083 606 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 ERAL1O75616 437 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 GGPS1O95749 300 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 DNTTP04053 509 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 LINC00271P0C7V0 271 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 MYBL1P10243 752 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 ZNF23P17027 643 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 S1PR1P21453 382 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 KCNA5P22460 613 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 MCCP23508 829 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 NMBRP28336 390 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 TKTP29401 623 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 CORO1AP31146 461 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 APOBEC1P41238 236 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 FMO5P49326 533 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 COMPP49747 757 aaPredicted RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 SNAP25P60880 206 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 TSPY1Q01534 308 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 BNC1Q01954 994 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 KLRC3Q07444 240 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 BAATQ14032 418 aaPredicted RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 ASIC2Q16515 512 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 CCL14Q16627 93 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 SYT16Q17RD7 645 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 SBK1Q52WX2 424 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 PDSS1Q5T2R2 415 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 LRCH2Q5VUJ6 765 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 OR7E24Q6IFN5 339 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 ZNF280DQ6N043 979 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 MFSD6Q6ZSS7 791 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 KRT74Q7RTS7 529 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 GPR142Q7Z601 462 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 LDB1Q86U70 411 aaPredicted RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 LINC00346Q8IVM7 164 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 FOXRED2Q8IWF2 684 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 MUC20Q8N307 709 aaPredicted RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 NME8Q8N427 588 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 MAB21L3Q8N8X9 362 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 PPFIBP2Q8ND30 876 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 LILRB1Q8NHL6 650 aaPredicted RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 DUSP19Q8WTR2 217 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 U2AF1L4Q8WU68 220 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 PHF21AQ96BD5 680 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 TMCO6Q96DC7 493 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 BAG1Q99933 345 aaPredicted RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 WACQ9BTA9 647 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 CENPOQ9BU64 300 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 MOV10L1Q9BXT6 1211 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 TXLNGYQ9BZA5 131 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 PORCNQ9H237 461 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 KCNK15Q9H427 330 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 WDR26Q9H7D7 661 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 VCPKMTQ9H867 229 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 UPF2Q9HAU5 1272 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 RAVER2Q9HCJ3 691 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 VAT1LQ9HCJ6 419 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 RCC2Q9P258 522 aaKnown RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 SLC24A2Q9UI40 661 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 ZHX1Q9UKY1 873 aaPredicted RBP4.07□□□□□ -1.76
HTT-210ENST00000512909 B3GALT5Q9Y2C3 310 aa4.07□□□□□ -1.76
HTT-210ENST00000512909 GOLGB1Q14789 3259 aaKnown RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 IGHV4OR15-8A0A075B7B6 117 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 OR5K3A6NET4 321 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 SLC15A5A6NIM6 579 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 HIP1O00291 1037 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 WDR46O15213 610 aaKnown RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 SSX4O60224 188 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 NMT2O60551 498 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 EIF5BO60841 1220 aaKnown RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 ZNF217O75362 1048 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 ZBTB11O95625 1053 aaPredicted RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 AFPP02771 609 aaKnown RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 ATP1A1P05023 1023 aaKnown RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 PGK2P07205 417 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 TUBBP07437 444 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 HRH2P25021 359 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 CCND3P30281 292 aaPredicted RBP4.06□□□□□ -1.76
HTT-210ENST00000512909 SLC1A4P43007 532 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 LINC00205P59089 165 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 ISL1P61371 349 aa4.06□□□□□ -1.76
HTT-210ENST00000512909 RPS18P62269 152 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms