RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 KIR2DL3P43628 341 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 AQP5P55064 265 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 TPTEP56180 551 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 EFR3AQ14156 821 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 DLG2Q15700 870 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ATPAF1Q5TC12 328 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 ASB18Q6ZVZ8 466 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 BTLAQ7Z6A9 289 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 LRRTM4Q86VH4 590 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 DEFB123Q8N688 67 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ST7LQ8TDW4 575 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 CYB5D2Q8WUJ1 264 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 CNOT9Q92600 299 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 IL22Q9GZX6 179 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 SEMA6CQ9H3T2 930 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 PCYOX1Q9UHG3 505 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 A0A1B0GVC2 190 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 SMIM35A0A1B0GVV1 85 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 WNT9AO14904 365 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 RNF13O43567 381 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 IPO13O94829 963 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 CD63P08962 238 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 CD79AP11912 226 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 GSTM2P28161 218 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 DLG4P78352 724 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 TPGS2Q68CL5 300 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 MBLAC2Q68D91 279 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 RFWD3Q6PCD5 774 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ZNF554Q86TJ5 538 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ZFP90Q8TF47 636 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 C3orf49Q96BT1 292 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ZBED3Q96IU2 234 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 RPL10LQ96L21 214 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 HS6ST2Q96MM7 605 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 NTPCRQ9BSD7 190 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 ROPN1BQ9BZX4 212 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 ROPN1Q9HAT0 212 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 SAMHD1Q9Y3Z3 626 aaKnown RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 POLR3HQ9Y535 204 aaPredicted RBP8.76□□□□□ -1.01
VCAN-208ENST00000512590 AP4B1Q9Y6B7 739 aa8.76□□□□□ -1.01
VCAN-208ENST00000512590 ZNF891A8MT65 544 aaPredicted RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 CLOCKO15516 846 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SDC3O75056 442 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 TNFSF9P41273 254 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 MAGEA12P43365 314 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 S100A10P60903 97 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 NIPAL4Q0D2K0 466 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 DGCR6Q14129 220 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 NKPD1Q17RQ9 610 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 PARP15Q460N3 678 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 GDPD4Q6W3E5 623 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ZPBP2Q6X784 338 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 FAM110BQ8TC76 370 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 TRIB2Q92519 343 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 MCTS1Q9ULC4 181 aaKnown RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 BTRCQ9Y297 605 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 NPEPPSL1A6NEC2 478 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 E5RJQ4 531 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 USP12O75317 370 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 KRT36O76013 467 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 IFNA2P01563 188 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 FAPQ12884 760 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 KYQ8NBH2 561 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 CSPG4P5Q96PW8 444 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 NDNQ99608 321 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ZNF490Q9ULM2 529 aaPredicted RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 C2orf74A8MZ97 194 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SLC6A6P31641 620 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 C3P1Q6ZMU1 363 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SAPCD2Q86UD0 394 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 C8orf59Q8N0T1 100 aaPredicted RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 MFSD2AQ8NA29 543 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 DBF4BQ8NFT6 615 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 OR10H4Q8NGA5 316 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 KLHL42Q9P2K6 505 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ARHGEF12Q9NZN5 1544 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SAMD9Q5K651 1589 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 MATN2O00339 956 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 HNF1AP20823 631 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 CCL11P51671 97 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ATP6V0D1P61421 351 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ECT2LQ008S8 904 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 LMAN2Q12907 356 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 NAB1Q13506 487 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 TEAD2Q15562 447 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SLC35F1Q5T1Q4 408 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 POTEHQ6S545 545 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 TOP6BLQ8N6T0 577 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 KCTD4Q8WVF5 259 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 FBXL18Q96ME1 805 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 PELOQ9BRX2 385 aaKnown RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 EBF3Q9H4W6 596 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SLC39A1Q9NY26 324 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 APOBEC3BQ9UH17 382 aaKnown RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 FKBPLQ9UIM3 349 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ZSCAN5BA6NJL1 495 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 CLDN5O00501 218 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 RNASET2O00584 256 aaKnown RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 S100A2P29034 98 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SLC18A2Q05940 514 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms