RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 CLEC17AQ6ZS10 378 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 C1orf122Q6ZSJ8 110 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 GALNT5Q7Z7M9 940 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 TRPT1Q86TN4 253 aaKnown RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 NME8Q8N427 588 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 FCAMRQ8WWV6 532 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 LITAFQ99732 161 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 ZHX3Q9H4I2 956 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 SCRT2Q9NQ03 307 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 PAG1Q9NWQ8 432 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 ZNF624Q9P2J8 865 aaPredicted RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 DNAJB4Q9UDY4 337 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 JRKLQ9Y4A0 524 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 DUOX1Q9NRD9 1551 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 SIPA1L3O60292 1781 aaPredicted RBP4.21□□□□□ -1.74
PDE4D-220ENST00000512069 KIF7Q2M1P5 1343 aa4.21□□□□□ -1.74
PDE4D-220ENST00000512069 PSMD14O00487 310 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 TPPPO94811 219 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 GCNT3O95395 438 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 RB1P06400 928 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 CALRP27797 417 aaKnown RBP4.2□□□□□ -1.74
PDE4D-220ENST00000512069 MMP15P51511 669 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 ZC2HC1CQ53FD0 456 aaPredicted RBP4.2□□□□□ -1.74
PDE4D-220ENST00000512069 CLEC4GQ6UXB4 293 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 GALNT13Q8IUC8 556 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 TDHQ8IZJ6 230 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 TTC39CQ8N584 583 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 ZNF473Q8WTR7 871 aaKnown RBP4.2□□□□□ -1.74
PDE4D-220ENST00000512069 TMEM190Q8WZ59 177 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 WBP2Q969T9 261 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 PRMT6Q96LA8 375 aaPredicted RBP4.2□□□□□ -1.74
PDE4D-220ENST00000512069 BARHL1Q9BZE3 327 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 DENND2DQ9H6A0 471 aaPredicted RBP4.2□□□□□ -1.74
PDE4D-220ENST00000512069 SLC38A7Q9NVC3 462 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 DDX43Q9NXZ2 648 aaKnown RBP4.2□□□□□ -1.74
PDE4D-220ENST00000512069 NIP7Q9Y221 180 aaKnown RBP eCLIP4.2□□□□□ -1.74
PDE4D-220ENST00000512069 LRRC37AA6NMS7 1700 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 MUC6Q6W4X9 2439 aa4.2□□□□□ -1.74
PDE4D-220ENST00000512069 ANKRD36CQ5JPF3 1778 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 COL2A1P02458 1487 aaPredicted RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 HEG1Q9ULI3 1381 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 A0A1W2PR77 199 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 PTGES3LE9PB15 166 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 PLK4O00444 970 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 NDUFS4O43181 175 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 TSHBP01222 138 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 APOHP02749 345 aaPredicted RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 CLTBP09497 229 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 PATE4P0C8F1 98 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 IGHV4-38-2P0DP08 117 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 CAPN3P20807 821 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 RPS12P25398 132 aaKnown RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 HOXC8P31273 242 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 GARSP41250 739 aaKnown RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 DRG2P55039 364 aaKnown RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 IRX3P78415 501 aaPredicted RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 CALD1Q05682 793 aaKnown RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 ZNF876PQ49A33 203 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 RBMS3Q6XE24 437 aaKnown RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 GPALPP1Q8IXQ4 340 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 SCYL3Q8IZE3 742 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 SKA1Q96BD8 255 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 SRSF8Q9BRL6 282 aaKnown RBP4.19□□□□□ -1.74
PDE4D-220ENST00000512069 SMARCAD1Q9H4L7 1026 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 ADPRHL2Q9NX46 363 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 AMACRQ9UHK6 382 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 ATP6V0A2Q9Y487 856 aa4.19□□□□□ -1.74
PDE4D-220ENST00000512069 PRUNE2Q8WUY3 3088 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 OTOFQ9HC10 1997 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 MGAMO43451 1857 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 RTL9Q8NET4 1388 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 GPR137BO60478 399 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 SYNCRIPO60506 623 aaKnown RBP4.18□□□□□ -1.74
PDE4D-220ENST00000512069 CIDEAO60543 219 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 ZG16O60844 167 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 NR3C1P04150 777 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 PRSS56P0CW18 603 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 RNF224P0DH78 156 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 PSMB10P40306 273 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 HADHAP40939 763 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 TNNT2P45379 298 aaPredicted RBP4.18□□□□□ -1.74
PDE4D-220ENST00000512069 ATP12AP54707 1039 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 PPP2R2BQ00005 443 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 MFAP5Q13361 173 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 KCNC3Q14003 757 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 FBXL22Q6P050 247 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 ARHGAP11AQ6P4F7 1023 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 C4orf50Q6ZRC1 276 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 APLFQ8IW19 511 aaPredicted RBP4.18□□□□□ -1.74
PDE4D-220ENST00000512069 L3MBTL4Q8NA19 623 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 C1orf131Q8NDD1 294 aaKnown RBP4.18□□□□□ -1.74
PDE4D-220ENST00000512069 SEMA4DQ92854 862 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 DDOQ99489 341 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 CDX2Q99626 313 aaPredicted RBP4.18□□□□□ -1.74
PDE4D-220ENST00000512069 TREX2Q9BQ50 279 aaPredicted RBP4.18□□□□□ -1.74
PDE4D-220ENST00000512069 FTOQ9C0B1 505 aaKnown RBP eCLIP4.18□□□□□ -1.74
PDE4D-220ENST00000512069 UBA5Q9GZZ9 404 aa4.18□□□□□ -1.74
PDE4D-220ENST00000512069 BICC1Q9H694 974 aaKnown RBP4.18□□□□□ -1.74
PDE4D-220ENST00000512069 MBNL1Q9NR56 388 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms