RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ZNF317Q96PQ6 595 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 ASCL2Q99929 193 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 C17orf80Q9BSJ5 609 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC25A23Q9BV35 468 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 NUP58Q9BVL2 599 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 OSBPL1AQ9BXW6 950 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 POTEKPQ9BYX7 375 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 RAB34Q9BZG1 259 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 LRMDAQ9H2I8 198 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 VIPAS39Q9H9C1 493 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 POLR1BQ9H9Y6 1135 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 GPN1Q9HCN4 374 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 VCX3AQ9NNX9 186 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 KLHL28Q9NXS3 571 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 VCANP13611 3396 aa4.92□□□□□ -1.62
TRAPPC11-208ENST00000511955 IGKV6D-21A0A0A0MT36 114 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ANKRD61A6NGH8 418 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 OR52A4PA6NMU1 304 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 KCNJ18B7U540 433 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 AGPSO00116 658 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 POLR1CO15160 346 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 PRPF6O94906 941 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 LCATP04180 440 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 KRT8P05787 483 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SPATA31C1P0DKV0 1188 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 EGR1P18146 543 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 YWHAQP27348 245 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 CRABP2P29373 138 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC26A3P40879 764 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 RPS5P46782 204 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 PIK3CGP48736 1102 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLCN7P51798 805 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ETF1P62495 437 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC13A2Q13183 592 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 KCNJ12Q14500 433 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 EPHA7Q15375 998 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SGSM1Q2NKQ1 1148 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZXDCQ2QGD7 858 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC36A3Q495N2 470 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 XKR4Q5GH76 650 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZNF618Q5T7W0 954 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 TCERG1LQ5VWI1 586 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 IER5Q5VY09 327 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 KRT79Q5XKE5 535 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC25A25Q6KCM7 469 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 EFCAB12Q6NXP0 572 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SERPINA13PQ6UXR4 307 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 OTOP2Q7RTS6 562 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ANKRD33Q7Z3H0 272 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 RTN4RL2Q86UN3 420 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ERICH1Q86X53 443 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 MISPQ8IVT2 679 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZDHHC14Q8IZN3 488 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM160A2Q8N612 972 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 COMMD1Q8N668 190 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 FAM86B1Q8N7N1 296 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 OR5T1Q8NG75 326 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 LRRC20Q8TCA0 184 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 DTD1Q8TEA8 209 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 MITD1Q8WV92 249 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 WFDC12Q8WWY7 111 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 TMEM143Q96AN5 459 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 DACT3Q96B18 629 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 MRGPRX1Q96LB2 322 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 NDNQ99608 321 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 OPN3Q9H1Y3 402 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 POFUT1Q9H488 388 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 GOLPH3LQ9H4A5 285 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 NT5MQ9NPB1 228 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 HIF1ANQ9NWT6 349 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 NOP53Q9NZM5 478 aaKnown RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ERVK-18Q9QC07 812 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 DKK4Q9UBT3 224 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 OSGIN1Q9UJX0 560 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 RAB21Q9UL25 225 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 RPH3ALQ9UNE2 315 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ENTPD4Q9Y227 616 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 PCDHGB1Q9Y5G3 927 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 COL6A3P12111 3177 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 MROH7Q68CQ1 1323 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 NRCAMQ92823 1304 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 IGSF9BQ9UPX0 1349 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 NOTOA8MTQ0 251 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 BECN2A8MW95 431 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ZBTB42B2RXF5 422 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 NR5A2O00482 541 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ADAMDEC1O15204 470 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 BNIP3LO60238 219 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 HBP1O60381 514 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ADAM11O75078 769 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SUPT3HO75486 399 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 FGBP02675 491 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 CD40P25942 277 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 ARNTP27540 789 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SERPINA4P29622 427 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 SLC1A3P43003 542 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 PXNP49023 591 aaPredicted RBP4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 CLCN5P51795 746 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 LGALS4P56470 323 aa4.91□□□□□ -1.62
TRAPPC11-208ENST00000511955 TNNC1P63316 161 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms