RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 WDFY2Q96P53 400 aa3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 BARD1Q99728 777 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 MMTAG2Q9BU76 263 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 C1QTNF5Q9BXJ0 243 aa3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 TMEM117Q9H0C3 514 aa3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 KCNN2Q9H2S1 579 aa3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 CD93Q9NPY3 652 aa3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 EIF2B3Q9NR50 452 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 C2orf42Q9NWW7 574 aa3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 STK39Q9UEW8 545 aa3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 CNOT8Q9UFF9 292 aaKnown RBP3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 CORO1CQ9ULV4 474 aaPredicted RBP3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 SDK1Q7Z5N4 2213 aa3.52□□□□□ -1.85
TOPBP1-208ENST00000511439 PTPRBP23467 1997 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 MYH1P12882 1939 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 A0A0U1RQJ8 604 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 M0QZ92 97 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 EXTL3O43909 919 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 ZIC3O60481 467 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 RFPL2O75678 378 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 SERPINI2O75830 405 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 IPO7O95373 1038 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CH25HO95992 272 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 NDUFB10O96000 172 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CENPBP07199 599 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 SFTPCP11686 197 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 AKR1B1P15121 316 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 MAOAP21397 527 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CCNE1P24864 410 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 C21orf33P30042 268 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 ADORA1P30542 326 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 HOXC13P31276 330 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 DHPSP49366 369 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 METAP2P50579 478 aaKnown RBP eCLIP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CLNS1AP54105 237 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 DRG2P55039 364 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 NAP1L1P55209 391 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 BNC1Q01954 994 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CEBPZQ03701 1054 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 GFPT1Q06210 699 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 GOLGA8DPQ0D2H9 430 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 NAE1Q13564 534 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 PPP6R3Q5H9R7 873 aaPredicted RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 FAM69BQ5VUD6 431 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 SPATA1Q5VX52 437 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 FAM205BPQ63HN1 556 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 ITPRIPL1Q6GPH6 555 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 METTL2BQ6P1Q9 378 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CFAP161Q6P656 301 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 SARM1Q6SZW1 724 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 B3GNT6Q6ZMB0 384 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 RABEPKQ7Z6M1 372 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 HAPLN4Q86UW8 402 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 FJX1Q86VR8 437 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 ZC3HC1Q86WB0 502 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 ZNF248Q8NDW4 579 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 METTL2AQ96IZ6 378 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 PPP1R13BQ96KQ4 1090 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 TMEM68Q96MH6 324 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 TIGD1Q96MW7 591 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 TMEM47Q9BQJ4 181 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 GHITMQ9H3K2 345 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 BICC1Q9H694 974 aaKnown RBP3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 TRPV5Q9NQA5 729 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 TMEM161AQ9NX61 479 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 HMG20BQ9P0W2 317 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 RCOR1Q9UKL0 485 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CDC14AQ9UNH5 594 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 ERVK-11Q9UQG0 969 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CELSR1Q9NYQ6 3014 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 CACNA1DQ01668 2161 aa3.51□□□□□ -1.85
TOPBP1-208ENST00000511439 LCTP09848 1927 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 ICE1Q9Y2F5 2266 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 CCDC171Q6TFL3 1326 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 ATG2BQ96BY7 2078 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 IGLV5-52A0A0A0MRZ9 124 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 FRMD3A2A2Y4 597 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 DENND3A2RUS2 1198 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 MYO1GB0I1T2 1018 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 KCNJ13O60928 360 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 FTCDO95954 541 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 PRSS2P07478 247 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 CYC1P08574 325 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 ZNF182P17025 639 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 DDX5P17844 614 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 PPP2R1AP30153 589 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 HOXD13P35453 343 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 STAT2P52630 851 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 F2RL1P55085 397 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 DYNLL1P63167 89 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 PRAMEP78395 509 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 LTBQ06643 244 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 IKQ13123 557 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 BAATQ14032 418 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 KEAP1Q14145 624 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 PLCB4Q15147 1175 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 KRTAP27-1Q3LI81 207 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 KLHL35Q6PF15 583 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 SEPT14Q6ZU15 432 aa3.5□□□□□ -1.85
TOPBP1-208ENST00000511439 USP43Q70EL4 1123 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms