RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RAD9BQ6WBX8 426 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 OVCH1Q7RTY7 1134 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 LDB1Q86U70 411 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-202ENST00000509637 TAX1BP1Q86VP1 789 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 CLEC1AQ8NC01 280 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 CATSPER1Q8NEC5 780 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 OR52K1Q8NGK4 314 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 SLC35B2Q8TB61 432 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 UBE2Q2Q8WVN8 375 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 HDAC10Q969S8 669 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■■■ 54.9
RAB40C-202ENST00000509637 ZNF285Q96NJ3 590 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 AP1M1Q9BXS5 423 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 ATP13A2Q9NQ11 1180 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 OR6C2Q9NZP2 312 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 CTSFQ9UBX1 484 aa15.28■□□□□ 0.04
RAB40C-202ENST00000509637 GPN3Q9UHW5 284 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-202ENST00000509637 FEZ2Q9UHY8 353 aaPredicted RBP15.28■□□□□ 0.04
RAB40C-202ENST00000509637 NOVA2Q9UNW9 492 aaKnown RBP15.28■□□□□ 0.04
RAB40C-202ENST00000509637 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.28■□□□□ 0.04
RAB40C-202ENST00000509637 CTSVO60911 334 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 GPC4O75487 556 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 KLHL18O94889 574 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 GOT2P00505 430 aaKnown RBP15.27■□□□□ 0.04
RAB40C-202ENST00000509637 TPM1P09493 284 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 ALAS2P22557 587 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 MMP11P24347 488 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 NSG1P42857 185 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 OR1D4P47884 311 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 RWDD2BP57060 319 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 CCSMST1Q4G0I0 132 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 TTLL10Q6ZVT0 673 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 TICAM1Q8IUC6 712 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 PARP9Q8IXQ6 854 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 KRT222Q8N1A0 295 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 METTL27Q8N6F8 245 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-202ENST00000509637 IP6K3Q96PC2 410 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 TMEM121Q9BTD3 319 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 ILKAPQ9H0C8 392 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-202ENST00000509637 NDOR1Q9UHB4 597 aa15.27■□□□□ 0.04
RAB40C-202ENST00000509637 EPN1Q9Y6I3 576 aaPredicted RBP15.27■□□□□ 0.04
RAB40C-202ENST00000509637 PEX12O00623 359 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 WISP2O76076 250 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 GSTM1P09488 218 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 VARSP26640 1264 aaKnown RBP15.26■□□□□ 0.03
RAB40C-202ENST00000509637 SNRPNP63162 240 aaKnown RBP15.26■□□□□ 0.03
RAB40C-202ENST00000509637 GSTM4Q03013 218 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 SRSF11Q05519 484 aaKnown RBP15.26■□□□□ 0.03
RAB40C-202ENST00000509637 KIR2DS3Q14952 304 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 KCTD19Q17RG1 926 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-202ENST00000509637 LYPLAL1Q5VWZ2 237 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 SLC22A15Q8IZD6 547 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 SHISA5Q8N114 240 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 ZADH2Q8N4Q0 377 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 ACRBPQ8NEB7 543 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 GRHL3Q8TE85 626 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 N4BP2L2Q92802 583 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-202ENST00000509637 C5orf34Q96MH7 638 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 TSPY26PQ9H489 355 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 SOX17Q9H6I2 414 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-202ENST00000509637 VPS37BQ9H9H4 285 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 MARCH4Q9P2E8 410 aaPredicted RBP15.26■□□□□ 0.03
RAB40C-202ENST00000509637 POLG2Q9UHN1 485 aa15.26■□□□□ 0.03
RAB40C-202ENST00000509637 G3BP2Q9UN86 482 aaKnown RBP15.26■□□□□ 0.03
RAB40C-202ENST00000509637 MYO7BQ6PIF6 2116 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 LOC105369274A0A096LPK9 316 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 LOC102723532A0A0G2JNH3 316 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 VSTM2BA6NLU5 285 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 ETS1P14921 441 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 ITGA3P26006 1051 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 PSMB5P28074 263 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 ACVR1Q04771 509 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 AIMP2Q13155 320 aaKnown RBP15.25■□□□□ 0.03
RAB40C-202ENST00000509637 PRAMEF13Q5VWM6 474 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 FRMPD2BQ6IN97 320 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 FIGLAQ6QHK4 219 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 ARHGEF18Q6ZSZ5 1173 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 TMTC1Q8IUR5 882 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 CCDC170Q8IYT3 715 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 OR4N4Q8N0Y3 316 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 ST6GALNAC3Q8NDV1 305 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 CFAP61Q8NHU2 1237 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 ATG4AQ8WYN0 398 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 WDR77Q9BQA1 342 aaPredicted RBP15.25■□□□□ 0.03
RAB40C-202ENST00000509637 NDC1Q9BTX1 674 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 LRRC40Q9H9A6 602 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 ETNK1Q9HBU6 452 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 ENAMQ9NRM1 1142 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 TXLNGQ9NUQ3 528 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 SRPK3Q9UPE1 567 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 RUVBL2Q9Y230 463 aaKnown RBP15.25■□□□□ 0.03
RAB40C-202ENST00000509637 NFS1Q9Y697 457 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 MAU2Q9Y6X3 613 aa15.25■□□□□ 0.03
RAB40C-202ENST00000509637 A0A1B0GX78 115 aa15.24■□□□□ 0.03
RAB40C-202ENST00000509637 LRRTM2O43300 516 aa15.24■□□□□ 0.03
RAB40C-202ENST00000509637 MAP3K7O43318 606 aa15.24■□□□□ 0.03
RAB40C-202ENST00000509637 STK10O94804 968 aaKnown RBP15.24■□□□□ 0.03
RAB40C-202ENST00000509637 TJP3O95049 919 aa15.24■□□□□ 0.03
RAB40C-202ENST00000509637 FTH1P02794 183 aa15.24■□□□□ 0.03
RAB40C-202ENST00000509637 CD9P21926 228 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms