RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 SERAC1Q96JX3 654 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 RNF157Q96PX1 679 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 LMF1Q96S06 567 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 DCLRE1CQ96SD1 692 aaKnown RBP2.21□□□□□ -2.05
CAST-226ENST00000509529 NAT9Q9BTE0 207 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 PI4K2AQ9BTU6 479 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 TBCDQ9BTW9 1192 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 MED18Q9BUE0 208 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 FUNDC2Q9BWH2 189 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 REG4Q9BYZ8 158 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 FAM49AQ9H0Q0 323 aaPredicted RBP2.21□□□□□ -2.05
CAST-226ENST00000509529 THAP2Q9H0W7 228 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 NT5DC2Q9H857 520 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 HEXA-AS1Q9H8Q6 139 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 SEC61A2Q9H9S3 476 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 RNF122Q9H9V4 155 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 SNX15Q9NRS6 342 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 RASSF1Q9NS23 344 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 KCNH7Q9NS40 1196 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 ANKEF1Q9NU02 776 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 PPARGC1AQ9UBK2 798 aaKnown RBP2.21□□□□□ -2.05
CAST-226ENST00000509529 CPNE7Q9UBL6 633 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 OPTCQ9UBM4 332 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 KLQ9UEF7 1012 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 RGS17Q9UGC6 210 aaPredicted RBP2.21□□□□□ -2.05
CAST-226ENST00000509529 ZNF229Q9UJW7 825 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 ADAM29Q9UKF5 820 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 EMCNQ9ULC0 261 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 CAB39Q9Y376 341 aaPredicted RBP2.21□□□□□ -2.05
CAST-226ENST00000509529 IPPQ9Y573 584 aa2.21□□□□□ -2.05
CAST-226ENST00000509529 MAGED1Q9Y5V3 778 aaPredicted RBP2.21□□□□□ -2.05
CAST-226ENST00000509529 SNED1Q8TER0 1413 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 MYH14Q7Z406 1995 aaKnown RBP2.21□□□□□ -2.06
CAST-226ENST00000509529 ITGB4P16144 1822 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 PMS2P1A4D2B8 440 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 CCDC154A6NI56 674 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 ARGFXA6NJG6 315 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 F8W036 122 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 IFRD1O00458 451 aaPredicted RBP2.21□□□□□ -2.06
CAST-226ENST00000509529 KIAA0355O15063 1070 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 NKRFO15226 690 aaKnown RBP eCLIP2.21□□□□□ -2.06
CAST-226ENST00000509529 HDAC3O15379 428 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 SPOPO43791 374 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 EDIL3O43854 480 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 SELENOFO60613 162 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 HCN1O60741 890 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 FAM20BO75063 409 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 TMEM127O75204 238 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 ENTPD3O75355 529 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 SLC43A1O75387 559 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 LRCH4O75427 683 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 MED24O75448 989 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 CCNKO75909 580 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 EPN2O95208 641 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 APBB3O95704 486 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 SNHG28P0DPA3 235 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 ARSBP15848 533 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 ZNF182P17025 639 aaPredicted RBP2.21□□□□□ -2.06
CAST-226ENST00000509529 RAB4AP20338 218 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 BGNP21810 368 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 MAPK3P27361 379 aaPredicted RBP2.21□□□□□ -2.06
CAST-226ENST00000509529 HTR1BP28222 390 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 GGT5P36269 586 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 MATKP42679 507 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 ARHGDIBP52566 201 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 HK3P52790 923 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 EIF6P56537 245 aaKnown RBP2.21□□□□□ -2.06
CAST-226ENST00000509529 PER3P56645 1201 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 MAP3K7CLP57077 242 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 ABCE1P61221 599 aaKnown RBP2.21□□□□□ -2.06
CAST-226ENST00000509529 PRAMEP78395 509 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 CNTN1Q12860 1018 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 STX5Q13190 355 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 EIF4EBP2Q13542 120 aaPredicted RBP2.21□□□□□ -2.06
CAST-226ENST00000509529 GRAPQ13588 217 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 PWP1Q13610 501 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 CUL2Q13617 745 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 IRF3Q14653 427 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 KCTD2Q14681 263 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 TBCEQ15813 527 aaPredicted RBP2.21□□□□□ -2.06
CAST-226ENST00000509529 VPS72Q15906 364 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 SMU1Q2TAY7 513 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 DEFB115Q30KQ5 88 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 BTBD16Q32M84 506 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 STEAP3Q658P3 488 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 SDE2Q6IQ49 451 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 KCNT2Q6UVM3 1135 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 CYP20A1Q6UW02 462 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 ARSKQ6UWY0 536 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 TMC5Q6UXY8 1006 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 UNC5DQ6UXZ4 953 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 MON1BQ7L1V2 547 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 KDELC2Q7Z4H8 507 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 MILR1Q7Z6M3 343 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 MICU3Q86XE3 530 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 PROSER1Q86XN7 944 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 RNF130Q86XS8 419 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 ADGRF4Q8IZF3 695 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 DEFB107AQ8IZN7 70 aa2.21□□□□□ -2.06
CAST-226ENST00000509529 C8orf59Q8N0T1 100 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms