RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 IL22Q9GZX6 179 aa12.17□□□□□ -0.46
KDM3B-206ENST00000509468 EIF2B3Q9NR50 452 aaKnown RBP12.17□□□□□ -0.46
KDM3B-206ENST00000509468 HOMER3Q9NSC5 361 aa12.17□□□□□ -0.46
KDM3B-206ENST00000509468 EURLQ9NYK6 297 aa12.17□□□□□ -0.46
KDM3B-206ENST00000509468 GPR83Q9NYM4 423 aa12.17□□□□□ -0.46
KDM3B-206ENST00000509468 PLAGL1Q9UM63 463 aa12.17□□□□□ -0.46
KDM3B-206ENST00000509468 CDYLQ9Y232 598 aa12.17□□□□□ -0.46
KDM3B-206ENST00000509468 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
KDM3B-206ENST00000509468 FLNCQ14315 2725 aa12.17□□□□□ -0.46
KDM3B-206ENST00000509468 PFDN6O15212 129 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 NDUFS3O75489 264 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 S1PR4O95977 384 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 ALAS2P22557 587 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 PKLRP30613 574 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 SESN2P58004 480 aaPredicted RBP12.16□□□□□ -0.46
KDM3B-206ENST00000509468 ATP1A4Q13733 1029 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 SEMA3AQ14563 771 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 SF1Q15637 639 aaKnown RBP12.16□□□□□ -0.46
KDM3B-206ENST00000509468 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 TCTE1Q5JU00 501 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 FAM69BQ5VUD6 431 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 YOD1Q5VVQ6 348 aaPredicted RBP12.16□□□□□ -0.46
KDM3B-206ENST00000509468 JMJD6Q6NYC1 403 aaPredicted RBP12.16□□□□□ -0.46
KDM3B-206ENST00000509468 ZNF662Q6ZS27 426 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 PRUNE1Q86TP1 453 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 VRK3Q8IV63 474 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 DCUN1D3Q8IWE4 304 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 MPP5Q8N3R9 675 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 CLEC1AQ8NC01 280 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 OR2Y1Q8NGV0 311 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 OR2L8Q8NGY9 312 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 MAGEC3Q8TD91 643 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 SMAD5Q99717 465 aaKnown RBP12.16□□□□□ -0.46
KDM3B-206ENST00000509468 NUDT9Q9BW91 350 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 RAB11FIP5Q9BXF6 653 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 SLAMF7Q9NQ25 335 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 GNPTGQ9UJJ9 305 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 MAP4K5Q9Y4K4 846 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 PCM1Q15154 2024 aa12.16□□□□□ -0.46
KDM3B-206ENST00000509468 IQCF5A8MTL0 148 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 TARM1B6A8C7 271 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 HCRTR1O43613 425 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 SRPX2O60687 465 aaPredicted RBP12.15□□□□□ -0.46
KDM3B-206ENST00000509468 SNRNP200O75643 2136 aaKnown RBP12.15□□□□□ -0.46
KDM3B-206ENST00000509468 ALPPP05187 535 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 ZSCAN5DPP0CG00 497 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 GP1BBP13224 206 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 PEBP1P30086 187 aaKnown RBP12.15□□□□□ -0.46
KDM3B-206ENST00000509468 SOX8P57073 446 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 SARNPP82979 210 aaKnown RBP12.15□□□□□ -0.46
KDM3B-206ENST00000509468 CDK16Q00536 496 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 DEFB110Q30KQ9 67 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 FAM214AQ32MH5 1076 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 FHL5Q5TD97 284 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 ARMC3Q5W041 872 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 MRNIPQ6NTE8 343 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 OTOAQ7RTW8 1153 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 LDB1Q86U70 411 aaPredicted RBP12.15□□□□□ -0.46
KDM3B-206ENST00000509468 KRT222Q8N1A0 295 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 LINC01555Q8NAE3 123 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 PNPLA2Q96AD5 504 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 FOPNLQ96NB1 174 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 TCF12Q99081 682 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 MENTQ9BUN1 341 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 LRRC4CQ9HCJ2 640 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 ATP13A2Q9NQ11 1180 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 TREX1Q9NSU2 369 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 IL1RAPL1Q9NZN1 696 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 DHCR7Q9UBM7 475 aaKnown RBP12.15□□□□□ -0.46
KDM3B-206ENST00000509468 ANKRD12Q6UB98 2062 aa12.15□□□□□ -0.46
KDM3B-206ENST00000509468 RASGRF2O14827 1237 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 IPO13O94829 963 aaKnown RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 SORBS2O94875 1100 aaKnown RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 ONECUT2O95948 504 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 ALBP02768 609 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 CCDC175P0C221 793 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 MAGP20916 626 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 RPS3P23396 243 aaKnown RBP eCLIP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 CCNFP41002 786 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 BASP1P80723 227 aaKnown RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 GRB7Q14451 532 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 GRM7Q14831 915 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 SIX1Q15475 284 aaPredicted RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 INPP5JQ15735 1006 aaPredicted RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 DCAF10Q5QP82 559 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 VWA5B1Q5TIE3 1220 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 MRPL14Q6P1L8 145 aaKnown RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 FIGLAQ6QHK4 219 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 IGFL3Q6UXB1 125 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 OVCH1Q7RTY7 1134 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 MRGPREQ86SM8 312 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 C2orf73Q8N5S3 287 aaPredicted RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 LMNTD1Q8N9Z9 388 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 SKA2Q8WVK7 121 aaPredicted RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 PSMG3-AS1Q96PY0 264 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 KIFC1Q9BW19 673 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 P2RY12Q9H244 342 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 WDR54Q9H977 334 aa12.14□□□□□ -0.47
KDM3B-206ENST00000509468 MRM3Q9HC36 420 aaKnown RBP12.14□□□□□ -0.47
KDM3B-206ENST00000509468 P4HTMQ9NXG6 502 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms