RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 MBNL1Q9NR56 388 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PNPLA3Q9NST1 481 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 MAN2C1Q9NTJ4 1040 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 GID8Q9NWU2 228 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 THG1LQ9NWX6 298 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 MTMR4Q9NYA4 1195 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 BTBD7Q9P203 1132 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 IL20RAQ9UHF4 553 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ENPP5Q9UJA9 477 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 INTS6Q9UL03 887 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 DIMT1Q9UNQ2 313 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PLCL2Q9UPR0 1127 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 TBC1D30Q9Y2I9 924 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 IFT52Q9Y366 437 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 HBS1LQ9Y450 684 aaKnown RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 MFHAS1Q9Y4C4 1052 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PCDHA1Q9Y5I3 950 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 RNF215Q9Y6U7 377 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 PFASO15067 1338 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 MN1Q10571 1320 aaPredicted RBP4.43□□□□□ -1.7
NIPBL-206ENST00000509429 CDHR2Q9BYE9 1310 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 ERVK-7P63135 1459 aa4.43□□□□□ -1.7
NIPBL-206ENST00000509429 A0A0G2JNJ9 132 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 A0A0J9YVX5 310 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 A0A0U1RQS6 177 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 A0A1W2PRG0 241 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 GLOD5A6NK44 160 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 C12orf71A8MTZ7 269 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 TCP11X1B4DZS4 312 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ATP6V1G2-DDX39BF2Z307 99 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 F8WDY8 70 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 H7C1Q1 480 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF701M0R085 212 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ARVCFO00192 962 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 LGALS8O00214 317 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 GRM8O00222 908 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PLK4O00444 970 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PRRG1O14668 218 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CLOCKO15516 846 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 AP5Z1O43299 807 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 DTNBO60941 627 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 NDUFS6O75380 124 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PSMD10O75832 226 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 RECQL5O94762 991 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CH25HO95992 272 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 F9P00740 461 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 APOC1P02654 83 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 TK1P04183 234 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 YES1P07947 543 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 KRT19P08727 400 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 GNAO1P09471 354 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CD3GP09693 182 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PLA2G4BP0C869 781 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 HKR1P10072 659 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CBR1P16152 277 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PTPN1P18031 435 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 FGFR2P21802 821 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 TACR3P29371 465 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 GNA11P29992 359 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PKLRP30613 574 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 YWHABP31946 246 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SFNP31947 248 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PLA2G5P39877 138 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 FASLGP48023 281 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 LMAN1P49257 510 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 CDC34P49427 236 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 KHKP50053 298 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PLK1P53350 603 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 NME5P56597 212 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SOX10P56693 466 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 KIAA1024LP59773 190 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ACTR2P61160 394 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 STX1BP61266 288 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 RPL10AP62906 217 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PHC1P78364 1004 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 MXRA7P84157 204 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 RELAQ04206 551 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SF3A3Q12874 501 aaKnown RBP eCLIP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 STX5Q13190 355 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 USF2Q15853 346 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 EZH2Q15910 746 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PPP1R3AQ16821 1122 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PITRM1Q5JRX3 1037 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 TCHHL1Q5QJ38 904 aaPredicted RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 LRRC38Q5VT99 294 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ATG16L1Q676U5 607 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SLFN12LQ6IEE8 588 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 KIAA1211LQ6NV74 962 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 DUS1LQ6P1R4 473 aaKnown RBP4.42□□□□□ -1.7
NIPBL-206ENST00000509429 FUT10Q6P4F1 479 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 SYVN1Q86TM6 617 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 IQCHQ86VS3 1027 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 FAM228AQ86W67 206 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 NME9Q86XW9 330 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 PLCZ1Q86YW0 608 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 MISPQ8IVT2 679 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 ENTHD1Q8IYW4 607 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 MCOLN2Q8IZK6 566 aa4.42□□□□□ -1.7
NIPBL-206ENST00000509429 KIRREL3Q8IZU9 778 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms