RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 NDUFS3O75489 264 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 KLF7O75840 302 aaPredicted RBP14.81□□□□□ -0.04
TPM3-219ENST00000509409 AGFG2O95081 481 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 IGHEP01854 428 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 GP1BBP13224 206 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 PEBP1P30086 187 aaKnown RBP14.81□□□□□ -0.04
TPM3-219ENST00000509409 PKLRP30613 574 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 RPL22P35268 128 aaKnown RBP14.81□□□□□ -0.04
TPM3-219ENST00000509409 UQCRFS1P47985 274 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 GABRA4P48169 554 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 TTPAP49638 278 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 ACVR1Q04771 509 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 SF1Q15637 639 aaKnown RBP14.81□□□□□ -0.04
TPM3-219ENST00000509409 INPP5JQ15735 1006 aaPredicted RBP14.81□□□□□ -0.04
TPM3-219ENST00000509409 NKAIN1Q4KMZ8 207 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 CLEC18BQ6UXF7 455 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 DCUN1D3Q8IWE4 304 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 OTUD6BQ8N6M0 293 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 CLEC1AQ8NC01 280 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 CLEC18CQ8NCF0 446 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 LKAAEAR1Q8TD35 194 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 DLG3Q92796 817 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 PTERQ96BW5 349 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 IL17FQ96PD4 163 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 INTS7Q9NVH2 962 aaKnown RBP14.81□□□□□ -0.04
TPM3-219ENST00000509409 EURLQ9NYK6 297 aa14.81□□□□□ -0.04
TPM3-219ENST00000509409 FLNCQ14315 2725 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 DOPEY2Q9Y3R5 2298 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 H3BMH7 237 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 MAGP20916 626 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 CD9P21926 228 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 AOAHP28039 575 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 GRIA3P42263 894 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 ARSFP54793 590 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 CRADDP78560 199 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 BASP1P80723 227 aaKnown RBP14.8□□□□□ -0.04
TPM3-219ENST00000509409 CCNG2Q16589 344 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 CYP2A13Q16696 494 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 MEI1Q5TIA1 1274 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 FIGLAQ6QHK4 219 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 UNC5DQ6UXZ4 953 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 TTLL10Q6ZVT0 673 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 MRGPREQ86SM8 312 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 RBMXL3Q8N7X1 1067 aaKnown RBP14.8□□□□□ -0.04
TPM3-219ENST00000509409 LINC01555Q8NAE3 123 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 OR2Y1Q8NGV0 311 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 DENND1AQ8TEH3 1009 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 PEX13Q92968 403 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 PANX3Q96QZ0 392 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 SMAD5Q99717 465 aaKnown RBP14.8□□□□□ -0.04
TPM3-219ENST00000509409 BFARQ9NZS9 450 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 MARCH4Q9P2E8 410 aaPredicted RBP14.8□□□□□ -0.04
TPM3-219ENST00000509409 GNPTGQ9UJJ9 305 aa14.8□□□□□ -0.04
TPM3-219ENST00000509409 DRG1Q9Y295 367 aaKnown RBP14.8□□□□□ -0.04
TPM3-219ENST00000509409 AP3B1O00203 1094 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 SEC16AO15027 2179 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 KLHL41O60662 606 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 SORBS2O94875 1100 aaKnown RBP14.79□□□□□ -0.04
TPM3-219ENST00000509409 SLCO2B1O94956 709 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 S1PR4O95977 384 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 PIM1P11309 404 aaPredicted RBP14.79□□□□□ -0.04
TPM3-219ENST00000509409 VARSP26640 1264 aaKnown RBP14.79□□□□□ -0.04
TPM3-219ENST00000509409 NPY2RP49146 381 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 ZC3H12BQ5HYM0 836 aaKnown RBP14.79□□□□□ -0.04
TPM3-219ENST00000509409 VWA5B1Q5TIE3 1220 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 SLC6A19Q695T7 634 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 C4orf22Q6V702 233 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 GALNT16Q8N428 558 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 RAB42Q8N4Z0 105 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 OR2L8Q8NGY9 312 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 MAIP1Q8WWC4 291 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 PNPLA2Q96AD5 504 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 FOPNLQ96NB1 174 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 P4HTMQ9NXG6 502 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 C5AR2Q9P296 337 aa14.79□□□□□ -0.04
TPM3-219ENST00000509409 TTC7AQ9ULT0 858 aaPredicted RBP14.79□□□□□ -0.04
TPM3-219ENST00000509409 TNRC6AQ8NDV7 1962 aaKnown RBP14.78□□□□□ -0.04
TPM3-219ENST00000509409 RASGRF2O14827 1237 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 KPNA5O15131 536 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 ALPPP05187 535 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 TERF1P54274 439 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 FOXL2P58012 376 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 PRR30Q53SZ7 412 aaPredicted RBP14.78□□□□□ -0.04
TPM3-219ENST00000509409 DCAF10Q5QP82 559 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 MRPL14Q6P1L8 145 aaKnown RBP14.78□□□□□ -0.04
TPM3-219ENST00000509409 OTOAQ7RTW8 1153 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 SDCCAG8Q86SQ7 713 aaPredicted RBP14.78□□□□□ -0.04
TPM3-219ENST00000509409 TTC29Q8NA56 475 aaPredicted RBP14.78□□□□□ -0.04
TPM3-219ENST00000509409 RAD51AP1Q96B01 352 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 PSMG3-AS1Q96PY0 264 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 RAB11FIP5Q9BXF6 653 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 SLC29A3Q9BZD2 475 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 IL22Q9GZX6 179 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 ATP13A2Q9NQ11 1180 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 EIF2B3Q9NR50 452 aaKnown RBP14.78□□□□□ -0.04
TPM3-219ENST00000509409 SPENQ96T58 3664 aaKnown RBP14.78□□□□□ -0.04
TPM3-219ENST00000509409 MED13Q9UHV7 2174 aa14.78□□□□□ -0.04
TPM3-219ENST00000509409 PTPN13Q12923 2485 aa14.77□□□□□ -0.04
TPM3-219ENST00000509409 A0A1B0GX78 115 aa14.77□□□□□ -0.05
TPM3-219ENST00000509409 MASP2O00187 686 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms