RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 SUSD6Q92537 303 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 SECISBP2LQ93073 1101 aaKnown RBP6.23□□□□□ -1.41
CHD1-205ENST00000508756 SLF1Q9BQI6 1058 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 NOL11Q9H8H0 719 aaKnown RBP6.23□□□□□ -1.41
CHD1-205ENST00000508756 CNOT10Q9H9A5 744 aaKnown RBP6.23□□□□□ -1.41
CHD1-205ENST00000508756 FGF21Q9NSA1 209 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 ANKEF1Q9NU02 776 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 ATAD3AQ9NVI7 634 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 SPHK1Q9NYA1 384 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 TAB2Q9NYJ8 693 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 STK26Q9P289 416 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 SLC24A2Q9UI40 661 aa6.23□□□□□ -1.41
CHD1-205ENST00000508756 CYSRT1A8MQ03 144 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 TRIM77I1YAP6 450 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 SPRY1O43609 319 aaPredicted RBP6.22□□□□□ -1.41
CHD1-205ENST00000508756 SERPINB2P05120 415 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 HAPLN1P10915 354 aaPredicted RBP6.22□□□□□ -1.41
CHD1-205ENST00000508756 IL11P20809 199 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 RAD52P43351 418 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 SNRPD1P62314 119 aaKnown RBP6.22□□□□□ -1.41
CHD1-205ENST00000508756 SQLEQ14534 574 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 ODF4Q2M2E3 257 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 SLC25A53Q5H9E4 307 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 FAM198BQ6UWH4 519 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 CLEC4GQ6UXB4 293 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 ZNF497Q6ZNH5 498 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 Q6ZSR9 355 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 ZNF611Q8N823 705 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 POMGNT2Q8NAT1 580 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 LINC00615Q96LM1 132 aaPredicted RBP6.22□□□□□ -1.41
CHD1-205ENST00000508756 RNF150Q9ULK6 438 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 TMED3Q9Y3Q3 217 aa6.22□□□□□ -1.41
CHD1-205ENST00000508756 TCRBV21S2A2A0A5A6 115 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 MAPK12P53778 367 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 TAF10Q12962 218 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 ALCAMQ13740 583 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 HNRNPDQ14103 355 aaKnown RBP6.21□□□□□ -1.42
CHD1-205ENST00000508756 ERMARDQ5T6L9 678 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 NUP54Q7Z3B4 507 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 OR52N5Q8NH56 324 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 PLCXD1Q9NUJ7 323 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 P4HTMQ9NXG6 502 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 IL17BQ9UHF5 180 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 RASAL2Q9UJF2 1139 aa6.21□□□□□ -1.42
CHD1-205ENST00000508756 TRBC2A0A5B9 178 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 ENO4A6NNW6 628 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 TADA2AO75478 443 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 IGHV2-70P01814 119 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 RAB40ALP0C0E4 278 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 CDH3P22223 829 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 BDNFP23560 247 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 MC5RP33032 325 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 BMXP51813 675 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 PPARDQ03181 441 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 UGT3A2Q3SY77 523 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 C9orf152Q5JTZ5 239 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 NAA16Q6N069 864 aaPredicted RBP6.2□□□□□ -1.42
CHD1-205ENST00000508756 C11orf63Q6NUN7 778 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 MFSD12Q6NUT3 480 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 NUDT13Q86X67 352 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 MRGPRDQ8TDS7 321 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 ZNF653Q96CK0 615 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 FAM20AQ96MK3 541 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 OR2B2Q9GZK3 357 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 MIS12Q9H081 205 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 SHARPINQ9H0F6 387 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 STUB1Q9UNE7 303 aa6.2□□□□□ -1.42
CHD1-205ENST00000508756 SNED1Q8TER0 1413 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 EDDM13A0A1B0GTR0 161 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 A0A1W2PPQ1 181 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 NEMP2A6NFY4 417 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 SLCO1B7G3V0H7 640 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 KLF11O14901 512 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 DFFBO76075 338 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 DDHD2O94830 711 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 RNF224P0DH78 156 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 CEBPBP17676 345 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 RPL21P46778 160 aaKnown RBP6.19□□□□□ -1.42
CHD1-205ENST00000508756 VEGFCP49767 419 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 MAZP56270 477 aaKnown RBP6.19□□□□□ -1.42
CHD1-205ENST00000508756 GCNT1Q02742 428 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 HERC3Q15034 1050 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 TEAD2Q15562 447 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 TMEM266Q2M3C6 531 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 VWC2Q2TAL6 325 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 MFSD4BQ5TF39 518 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 PRR27Q6MZM9 219 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 PSRC1Q6PGN9 363 aaPredicted RBP6.19□□□□□ -1.42
CHD1-205ENST00000508756 KIRREL3Q8IZU9 778 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 THAP8Q8NA92 274 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 KCTD6Q8NC69 237 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 OR2T6Q8NHC8 308 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 DYRK2Q92630 601 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 THOC1Q96FV9 657 aaKnown RBP6.19□□□□□ -1.42
CHD1-205ENST00000508756 TMX4Q9H1E5 349 aaPredicted RBP6.19□□□□□ -1.42
CHD1-205ENST00000508756 ATP13A3Q9H7F0 1226 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 KLHL8Q9P2G9 620 aaPredicted RBP6.19□□□□□ -1.42
CHD1-205ENST00000508756 TRIM17Q9Y577 477 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 RPS6KL1Q9Y6S9 549 aa6.19□□□□□ -1.42
CHD1-205ENST00000508756 P4HA2O15460 535 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms