RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TPH1P17752 444 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 ITGALP20701 1170 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 MGAT1P26572 445 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 MAT2AP31153 395 aaKnown RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 PTGER3P43115 390 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 BLKP51451 505 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 THOP1P52888 689 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 RRADP55042 308 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 C21orf59P57076 290 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 PFN3P60673 137 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 XIAPP98170 497 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 CACNG1Q06432 222 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 SRSF5Q13243 272 aaKnown RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 OLIG2Q13516 323 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 PEX6Q13608 980 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 ITIH4Q14624 930 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 IRF4Q15306 451 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 PCBP2Q15366 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 UGT8Q16880 541 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 ANKRD20A4Q4UJ75 823 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 CCDC38Q502W7 563 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 LRRC73Q5JTD7 316 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 AARS2Q5JTZ9 985 aaKnown RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 SPANXN3Q5MJ09 141 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 LDLRAP1Q5SW96 308 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TEX35Q5T0J7 233 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 CERCAMQ5T4B2 595 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 DENND2CQ68D51 928 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 RAET1GQ6H3X3 334 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 MRNIPQ6NTE8 343 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 WDR93Q6P2C0 686 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 CASC4Q6P4E1 433 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 PGM2L1Q6PCE3 622 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 AFTPHQ6ULP2 937 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 SDCCAG8Q86SQ7 713 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 SDR16C5Q8N3Y7 309 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 SUMF1Q8NBK3 374 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 GPR26Q8NDV2 337 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 OR4K2Q8NGD2 314 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 OR13J1Q8NGT2 312 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 GPR150Q8NGU9 434 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 FBXO25Q8TCJ0 367 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZNF398Q8TD17 642 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 PYROXD1Q8WU10 500 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 SNX19Q92543 992 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 GLYATL1Q969I3 302 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 EID2BQ96D98 161 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 HIC2Q96JB3 615 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZNF514Q96K75 400 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 DNAJC1Q96KC8 554 aaKnown RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 BMFQ96LC9 184 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TBATAQ96M53 351 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TTC25Q96NG3 672 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 FMO2Q99518 471 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 APOOQ9BUR5 198 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 BDH2Q9BUT1 245 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 RIOK2Q9BVS4 552 aaKnown RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 SPATA16Q9BXB7 569 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 NUSAP1Q9BXS6 441 aaKnown RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TEX101Q9BY14 249 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 WDR26Q9H7D7 661 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 RMI1Q9H9A7 625 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TM9SF3Q9HD45 589 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 IL26Q9NPH9 171 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 CHRAC1Q9NRG0 131 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TREX1Q9NSU2 369 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZDHHC18Q9NUE0 388 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 SYBUQ9NX95 663 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 PPP4R1LQ9P1A2 415 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 VPS18Q9P253 973 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TMPRSS11EQ9UL52 423 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 MAD1L1Q9Y6D9 718 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TEX264Q9Y6I9 313 aa5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 TDRD6O60522 2096 aaKnown RBP5.41□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZFHX2Q9C0A1 2572 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 TRBV5-4A0A0C4DH59 114 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 SPTY2D1-AS1A0A0U1RR47 76 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 POM121BA6NF01 834 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 GOLGA8MH3BSY2 632 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 RAD51BO15315 384 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PCDHGA12O60330 932 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 AVILO75366 819 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 SNUPNO95149 360 aaKnown RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 SLC25A14O95258 325 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 IVLP07476 585 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 RHOXF2BP0C7M4 288 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 CLEC2LP0C7M8 214 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 ZNF806P0C7X5 589 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 THEGLP0DJG4 465 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 OGNP20774 298 aaKnown RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 AGXTP21549 392 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 CCND1P24385 295 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 PHBP35232 272 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 MPLP40238 635 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 NSG1P42857 185 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 RXRGP48443 463 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 TTPAP49638 278 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 MRPS25P82663 173 aaKnown RBP5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 CDK3Q00526 305 aa5.4□□□□□ -1.54
HMGB1P44-201ENST00000508597 SEMG2Q02383 582 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms