RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 KIFC3Q9BVG8 833 aa3.88□□□□□ -1.79
UBE2D3-225ENST00000508476 GHITMQ9H3K2 345 aa3.88□□□□□ -1.79
UBE2D3-225ENST00000508476 WBP11Q9Y2W2 641 aaKnown RBP3.88□□□□□ -1.79
UBE2D3-225ENST00000508476 NISCHQ9Y2I1 1504 aa3.88□□□□□ -1.79
UBE2D3-225ENST00000508476 LOC102723996A0A087X1L8 192 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 TRIM49P0CI25 452 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 TRIM49CP0CI26 452 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 SMIM18P0DKX4 95 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 UGT1A4P22310 534 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 HOXD13P35453 343 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 RPL21P46778 160 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 MAZP56270 477 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 HERV-K104P61576 105 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 TAF1BQ53T94 588 aaPredicted RBP3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 RNASEH2BQ5TBB1 312 aaKnown RBP3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 ZNF343Q6P1L6 599 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 LMNTD2Q8IXW0 634 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 ZNF595Q8IYB9 648 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 AMER3Q8N944 861 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 ZNF519Q8TB69 540 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 PTPMT1Q8WUK0 201 aaPredicted RBP3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 ZNF486Q96H40 463 aaPredicted RBP3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 RAD9AQ99638 391 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 LRRC61Q9BV99 259 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 CPVLQ9H3G5 476 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 OSGEPL1Q9H4B0 414 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 SPHK2Q9NRA0 654 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 NUDT4Q9NZJ9 180 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 GRID1Q9ULK0 1009 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 TNNQ9UQP3 1299 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 ZHX2Q9Y6X8 837 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 ZNF644Q9H582 1327 aaPredicted RBP3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 PCNX3Q9H6A9 2034 aa3.87□□□□□ -1.79
UBE2D3-225ENST00000508476 C15orf61A6NNL5 157 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 ENO4A6NNW6 628 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 DARSP14868 501 aaKnown RBP3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 GJA1P17302 382 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 CDH3P22223 829 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 TLX1P31314 330 aaPredicted RBP3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 MNDAP41218 407 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 CDH13P55290 713 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 SLC8A3P57103 927 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 PCLAFQ15004 111 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 SLC25A47Q6Q0C1 308 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 GPRIN3Q6ZVF9 776 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 OR10G8Q8NGN5 311 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 CCDC107Q8WV48 283 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 SLCO2A1Q92959 643 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 SKA1Q96BD8 255 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 C10orf90Q96M02 699 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 NECTIN4Q96NY8 510 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 USP28Q96RU2 1077 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 KRT12Q99456 494 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 THAP2Q9H0W7 228 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 MMP27Q9H306 513 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 BLOC1S4Q9NUP1 217 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 HAUS2Q9NVX0 235 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 TBC1D29Q9UFV1 150 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 MOB4Q9Y3A3 225 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 CSAG2Q9Y5P2 127 aa3.86□□□□□ -1.79
UBE2D3-225ENST00000508476 GPR75-ASB3A0A0A6YYF3 556 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 A0A1W2PR80 420 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 FSD2A1L4K1 749 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 EPM2AB3EWF7 344 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 SOCS3O14543 225 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 MEIS2O14770 477 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 CAPN2P17655 700 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 CA9Q16790 459 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 ODF4Q2M2E3 257 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 FAM205BPQ63HN1 556 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 PRSS33Q8NF86 280 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 LPGAT1Q92604 370 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 DHX58Q96C10 678 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 MS4A10Q96PG2 267 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 CCDC177Q9NQR7 707 aaPredicted RBP3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 MAN2C1Q9NTJ4 1040 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 SPHK1Q9NYA1 384 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 PSD3Q9NYI0 1048 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 THEGQ9P2T0 379 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 ADD3Q9UEY8 706 aaKnown RBP3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 STUB1Q9UNE7 303 aa3.85□□□□□ -1.79
UBE2D3-225ENST00000508476 TSPAN1O60635 241 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 ENTPD3O75355 529 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 SLC9A3P48764 834 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 LBX1P52954 281 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 GSCP56915 257 aaPredicted RBP3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 HNRNPKP61978 463 aaKnown RBP eCLIP3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 MAT1AQ00266 395 aaKnown RBP3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 COX10Q12887 443 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 NFATC2Q13469 925 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 TNIP1Q15025 636 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 SYT14P1Q58G82 188 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 WLSQ5T9L3 541 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 ZNF774Q6NX45 483 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 GUF1Q8N442 669 aaKnown RBP3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 GPRC5AQ8NFJ5 357 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 OR13C3Q8NGS6 347 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 OR1L3Q8NH93 324 aa3.84□□□□□ -1.79
UBE2D3-225ENST00000508476 SSMEM1Q8WWF3 244 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms