RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 FAM46DQ8NEK8 389 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 TMIGD2Q96BF3 282 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SCGB3A2Q96PL1 93 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 COPS8Q99627 209 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 AARSD1Q9BTE6 412 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 C2orf49Q9BVC5 232 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 MAGIXQ9H6Y5 334 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 BRD9Q9H8M2 597 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 TRPV4Q9HBA0 871 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 TCF7L1Q9HCS4 588 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 FZD10Q9ULW2 581 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ANKRD26Q9UPS8 1709 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 A0A1B0GVI7 797 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CLCA1A8K7I4 914 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 M0R036 132 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 MT-ND2P03891 347 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CD2P06729 351 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 MYCLP1P12525 358 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 BDNFP23560 247 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 DCKP27707 260 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SCNN1AP37088 669 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 GRM5P41594 1212 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CXCR3P49682 368 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 FKBP1AP62942 108 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 KLF1Q13351 362 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 TMEM132BQ14DG7 1078 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 GNASQ5JWF2 1037 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CDKL4Q5MAI5 379 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PRSS48Q7RTY5 328 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ITIH5Q86UX2 942 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 NATD1Q8N6N6 113 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LINC00116Q8NCU8 138 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ASB15Q8WXK1 588 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 BHLHE41Q9C0J9 482 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 WDR6Q9NNW5 1121 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 FARSBQ9NSD9 589 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 EIF2B4Q9UI10 523 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF510Q9Y2H8 683 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PCDHGA4Q9Y5G9 962 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 BAZ2BQ9UIF8 2168 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LRRC14BA6NHZ5 514 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 ANXA2P2A6NMY6 339 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF487B1APH4 448 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 H3BRB1 525 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 TNFRSF10AO00220 468 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 AP1G1O43747 822 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 RFPL3O75679 317 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 RAB36O95755 333 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 ANXA2P07355 339 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 RPS12P25398 132 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 SLC5A2P31639 672 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 SMSP52788 366 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 TAS2R43P59537 309 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 TARDBPQ13148 414 aaKnown RBP eCLIP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 HNRNPA0Q13151 305 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 GRM2Q14416 872 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF460Q14592 562 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 LARS2Q15031 903 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 MSANTD1Q6ZTZ1 278 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 MOB2Q70IA6 237 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 PTF1AQ7RTS3 328 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 CIR1Q86X95 450 aaPredicted RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 CPNE8Q86YQ8 564 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 CRYBG2Q8N1P7 616 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 Q8N402 240 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 GALNT11Q8NCW6 608 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 GPRC5AQ8NFJ5 357 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 RPLP0P6Q8NHW5 317 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 MAFIPQ8WZ33 124 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 TIFAQ96CG3 184 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 NXPE2Q96DL1 559 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 ART5Q96L15 291 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 FCRL5Q96RD9 977 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 BARD1Q99728 777 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 UCK2Q9BZX2 261 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF350Q9GZX5 532 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 COMMD4Q9H0A8 199 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 IKZF4Q9H2S9 585 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 TUT1Q9H6E5 874 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 MEAF6Q9HAF1 191 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 TRIM36Q9NQ86 728 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 POLLQ9UGP5 575 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 AGO1Q9UL18 857 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 C1orf167Q5SNV9 1468 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 PRORSD1PA6NEY8 169 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 HOXA2O43364 376 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 GRID2O43424 1007 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 GATBO75879 557 aaKnown RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 RECQL4O94761 1208 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 UQCRC1P31930 480 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 MAP2K4P45985 399 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 GTF2A2P52657 109 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 GBX2P52951 348 aaPredicted RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 PLA2G16P53816 162 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 MAXP61244 160 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 TRAM1Q15629 374 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 GPR162Q16538 588 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 UBE2UQ5VVX9 321 aa7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 CAPN13Q6MZZ7 669 aaPredicted RBP7.16□□□□□ -1.26
UBE2D3-224ENST00000508474 FAM198BQ6UWH4 519 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms