RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 EID3Q8N140 333 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 DBF4BQ8NFT6 615 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 OR5AP2Q8NGF4 316 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 CCDC107Q8WV48 283 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 PRPF31Q8WWY3 499 aaKnown RBP4.33□□□□□ -1.72
DHFR-204ENST00000508282 DHX58Q96C10 678 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 RSRC1Q96IZ7 334 aaKnown RBP4.33□□□□□ -1.72
DHFR-204ENST00000508282 SERINC2Q96SA4 455 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 NUDT16L1Q9BRJ7 211 aaKnown RBP4.33□□□□□ -1.72
DHFR-204ENST00000508282 CABLES2Q9BTV7 478 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 FUCA2Q9BTY2 467 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 Q9N2K0 584 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 PDE7BQ9NP56 450 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 SPHK1Q9NYA1 384 aa4.33□□□□□ -1.72
DHFR-204ENST00000508282 IGLV7-46A0A075B6I9 117 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 A8MV72 311 aaPredicted RBP4.32□□□□□ -1.72
DHFR-204ENST00000508282 PGM3O95394 542 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 PTMSP20962 102 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 PTPN3P26045 913 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 EIF2DP41214 584 aaKnown RBP4.32□□□□□ -1.72
DHFR-204ENST00000508282 STK4Q13043 487 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 BAATQ14032 418 aaPredicted RBP4.32□□□□□ -1.72
DHFR-204ENST00000508282 SQLEQ14534 574 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 FAM133BQ5BKY9 247 aaKnown RBP4.32□□□□□ -1.72
DHFR-204ENST00000508282 SLC25A53Q5H9E4 307 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 IL27RAQ6UWB1 636 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 TMPRSS11BQ86T26 416 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 RTN4RL2Q86UN3 420 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 RAB42Q8N4Z0 105 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 OR52N5Q8NH56 324 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 SSMEM1Q8WWF3 244 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 JAKMIP2Q96AA8 810 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 TMCO6Q96DC7 493 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 IWS1Q96ST2 819 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 RAD9AQ99638 391 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 EGFL8Q99944 293 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 CLEC7AQ9BXN2 247 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 FGFBP2Q9BYJ0 223 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 OR2B2Q9GZK3 357 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 SHARPINQ9H0F6 387 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 WNT5BQ9H1J7 359 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.32□□□□□ -1.72
DHFR-204ENST00000508282 P4HTMQ9NXG6 502 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 CRNNQ9UBG3 495 aaPredicted RBP4.32□□□□□ -1.72
DHFR-204ENST00000508282 EPHA6Q9UF33 1036 aa4.32□□□□□ -1.72
DHFR-204ENST00000508282 COL2A1P02458 1487 aaPredicted RBP4.31□□□□□ -1.72
DHFR-204ENST00000508282 GLOD5A6NK44 160 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 DUS4LO95620 317 aaKnown RBP4.31□□□□□ -1.72
DHFR-204ENST00000508282 CLDN1O95832 211 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 DANCRP0C864 163 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 MAZP56270 477 aaKnown RBP4.31□□□□□ -1.72
DHFR-204ENST00000508282 ZNF415Q09FC8 603 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 SGSM1Q2NKQ1 1148 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 SYT14P1Q58G82 188 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 C20orf194Q5TEA3 1177 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 CDK20Q8IZL9 346 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 APPL2Q8NEU8 664 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 OR10S1Q8NGN2 331 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 AZIN2Q96A70 460 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 SPACA9Q96E40 222 aaPredicted RBP4.31□□□□□ -1.72
DHFR-204ENST00000508282 URM1Q9BTM9 101 aaKnown RBP4.31□□□□□ -1.72
DHFR-204ENST00000508282 MRPL1Q9BYD6 325 aaKnown RBP4.31□□□□□ -1.72
DHFR-204ENST00000508282 PITPNM3Q9BZ71 974 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 CPVLQ9H3G5 476 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 ERAP1Q9NZ08 941 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 GDE1Q9NZC3 331 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 GRID1Q9ULK0 1009 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 TMEM5Q9Y2B1 443 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 WDR37Q9Y2I8 494 aa4.31□□□□□ -1.72
DHFR-204ENST00000508282 A0A1B0GVY2 172 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 ZNF195O14628 629 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 MEIS2O14770 477 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 BEST1O76090 585 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 SMIM18P0DKX4 95 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 JAK1P23458 1154 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 ACTN2P35609 894 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 MNDAP41218 407 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 MATR3P43243 847 aaKnown RBP eCLIP4.3□□□□□ -1.72
DHFR-204ENST00000508282 RAD52P43351 418 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 HNRNPKP61978 463 aaKnown RBP eCLIP4.3□□□□□ -1.72
DHFR-204ENST00000508282 MAT1AQ00266 395 aaKnown RBP4.3□□□□□ -1.72
DHFR-204ENST00000508282 TAF10Q12962 218 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 HERC3Q15034 1050 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 SLC1A5Q15758 541 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 CA9Q16790 459 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 UGP2Q16851 508 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 ODF4Q2M2E3 257 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 CBWD6Q4V339 395 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 CBWD3Q5JTY5 395 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 PTAR1Q7Z6K3 402 aaPredicted RBP4.3□□□□□ -1.72
DHFR-204ENST00000508282 KRT77Q7Z794 578 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 SPDL1Q96EA4 605 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 RBM4BQ9BQ04 359 aaKnown RBP4.3□□□□□ -1.72
DHFR-204ENST00000508282 TRIM51Q9BSJ1 452 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 MXD3Q9BW11 206 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 OPA3Q9H6K4 179 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 DPP3Q9NY33 737 aa4.3□□□□□ -1.72
DHFR-204ENST00000508282 MRPL15Q9P015 296 aaKnown RBP4.3□□□□□ -1.72
DHFR-204ENST00000508282 NOL7Q9UMY1 257 aaKnown RBP4.3□□□□□ -1.72
DHFR-204ENST00000508282 ENO4A6NNW6 628 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms