RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	ZNF417	Q8TAU3	575 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	MAIP1	Q8WWC4	291 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SEC14L1	Q92503	715 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ANP32B	Q92688	251 aa	Known RBP	7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ZNF501	Q96CX3	271 aa	Predicted RBP	7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	STAMBPL1	Q96FJ0	436 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ELMO2	Q96JJ3	720 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ZNF778	Q96MU6	729 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	FERD3L	Q96RJ6	166 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ZNF587	Q96SQ5	575 aa	Predicted RBP	7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	LHX9	Q9NQ69	397 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ENAM	Q9NRM1	1142 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	KCND1	Q9NSA2	647 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	FAM8A1	Q9UBU6	413 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	POLG2	Q9UHN1	485 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	LNPEP	Q9UIQ6	1025 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CROT	Q9UKG9	612 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TRIM33	Q9UPN9	1127 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TCAF1	Q9Y4C2	921 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PRSS21	Q9Y6M0	314 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	UBR5	O95071	2799 aa	Predicted RBP	7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SVIL	O95425	2214 aa		7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	MDC1	Q14676	2089 aa	Known RBP	7.71	□□□□□ -1.18
UBE2D3-222	ENST00000508238	OR51F1	A6NGY5	319 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SLC9B1P1	A6NJY1	282 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	C2orf74	A8MZ97	194 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	BTN3A1	O00481	513 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	OR1I1	O60431	355 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CREG1	O75629	220 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	GOT2	P00505	430 aa	Known RBP	7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	FGG	P02679	453 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	OR56A5	P0C7T3	313 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ETS1	P14921	441 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	POLR2C	P19387	275 aa	Predicted RBP	7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	LOR	P23490	312 aa	Predicted RBP	7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SHMT2	P34897	504 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PREP	P48147	710 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	NPY2R	P49146	381 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	LMAN1	P49257	510 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	KCNAB2	Q13303	367 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SNX1	Q13596	522 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	DNASE1L3	Q13609	305 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	DNAJC21	Q5F1R6	531 aa	Known RBP	7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ZNF789	Q5FWF6	425 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	AARS2	Q5JTZ9	985 aa	Known RBP	7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PCID2	Q5JVF3	399 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ATG14	Q6ZNE5	492 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	MICALCL	Q6ZW33	695 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PRUNE1	Q86TP1	453 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ADGRF3	Q8IZF5	1079 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	MPP5	Q8N3R9	675 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SLC38A9	Q8NBW4	561 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	OR5K2	Q8NHB8	316 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ELMO1	Q92556	727 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PPM1M	Q96MI6	270 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	FRMD6	Q96NE9	622 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TCF12	Q99081	682 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CARD6	Q9BX69	1037 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	IL22	Q9GZX6	179 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	LZTFL1	Q9NQ48	299 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CHRAC1	Q9NRG0	131 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TREX1	Q9NSU2	369 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	OR6C2	Q9NZP2	312 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SLC2A6	Q9UGQ3	507 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	DOCK10	Q96BY6	2186 aa		7.7	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ICE1	Q9Y2F5	2266 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PIPSL	A2A3N6	862 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CCDC78	A2IDD5	438 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PRMT5	O14744	637 aa	Predicted RBP	7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SLC28A2	O43868	658 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	GPC4	O75487	556 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SCRG1	O75711	98 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SLCO2B1	O94956	709 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	NTRK1	P04629	796 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	KLK3	P07288	261 aa	Predicted RBP	7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ZSCAN5DP	P0CG00	497 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TPBGL	P0DKB5	382 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PRKAR1A	P10644	381 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ST6GAL1	P15907	406 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TPSB2	P20231	275 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CDH3	P22223	829 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PTPN4	P29074	926 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CCR7	P32248	378 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	RORA	P35398	523 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	MAGEA6	P43360	314 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	ARCN1	P48444	511 aa	Known RBP	7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TTPA	P49638	278 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PRAME	P78395	509 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CCZ1B	P86790	482 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	CCZ1	P86791	482 aa	Predicted RBP	7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PRKG2	Q13237	762 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	TPSAB1	Q15661	275 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	GPR19	Q15760	415 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	DEFB109B	Q30KR1	87 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	FASTKD1	Q53R41	847 aa	Known RBP	7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	PLEKHS1	Q5SXH7	462 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	IZUMO3	Q5VZ72	239 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	FBXO38	Q6PIJ6	1188 aa		7.69	□□□□□ -1.18
UBE2D3-222	ENST00000508238	SPESP1	Q6UW49	350 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms