RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CDRT15L2A8MXV6 281 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ISM1B1AKI9 464 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 EIF3FO00303 357 aaPredicted RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 BTN3A3O00478 584 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 BTN3A1O00481 513 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 MATN4O95460 622 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ZBTB11O95625 1053 aaPredicted RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 CATP04040 527 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 MPC1LP0DKB6 136 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 FGF3P11487 239 aaPredicted RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 ITIH1P19827 911 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 CD9P21926 228 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 CDH3P22223 829 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 MAP4P27816 1152 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 GABRB3P28472 473 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 SSTR1P30872 391 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 SLC5A2P31639 672 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 PHBP35232 272 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 HSD17B2P37059 387 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 EIF2S3P41091 472 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 RGS4P49798 205 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 RAB28P51157 221 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 SLC12A2P55011 1212 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 PCBP4P57723 403 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 HSD11B2P80365 405 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 MC2RQ01718 297 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ACY1Q03154 408 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 FOXM1Q08050 763 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 IL11RAQ14626 422 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 FASTKD3Q14CZ7 662 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 TRADDQ15628 312 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 KYNUQ16719 465 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ACSBG2Q5FVE4 666 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ARSJQ5FYB0 599 aaPredicted RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 TMTC4Q5T4D3 741 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 FAM45BPQ6NSW5 357 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ZNF549Q6P9A3 640 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 TRMT10BQ6PF06 316 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 ZDHHC24Q6UX98 284 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 CEACAM20Q6UY09 585 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 STRA8Q7Z7C7 330 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 CLEC14AQ86T13 490 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 IFT20Q8IY31 132 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ADGRF3Q8IZF5 1079 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 GPATCH11Q8N954 259 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 SIDT2Q8NBJ9 832 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 NOA1Q8NC60 698 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 FAM45AQ8TCE6 357 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 SLC22A18Q96BI1 424 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 TEFMQ96QE5 360 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 GPR21Q99679 349 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 MAP3K3Q99759 626 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 WDR83Q9BRX9 315 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 DDA1Q9BW61 102 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 DPH1Q9BZG8 443 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 XKR8Q9H6D3 395 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 PLAC1Q9HBJ0 212 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 GPAMQ9HCL2 828 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ASCL3Q9NQ33 180 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 C1GALT1Q9NS00 363 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 OCIAD1Q9NX40 245 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 ACTR10Q9NZ32 417 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 SEMA5BQ9P283 1151 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 GALPQ9UBC7 116 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 TRMT6Q9UJA5 497 aaKnown RBP7.04□□□□□ -1.28
GYPB-206ENST00000506516 PCDHGA3Q9Y5H0 932 aa7.04□□□□□ -1.28
GYPB-206ENST00000506516 PTPRBP23467 1997 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 IGHV5-51A0A0C4DH38 117 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 TCRBV9S1A1TA0A576 114 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 PABPN1LA6NDY0 278 aaKnown RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 SRRM3A6NNA2 597 aaPredicted RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 ZNF839A8K0R7 811 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 C9orf172C9J069 976 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 TAF4O00268 1085 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 RASGRF2O14827 1237 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 TLX3O43711 291 aaPredicted RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 KIF1CO43896 1103 aaKnown RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 PSIP1O75475 530 aaKnown RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 C1orf105O95561 183 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 CHRM5P08912 532 aaPredicted RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 HIST1H2AGP0C0S8 130 aaPredicted RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 NELFEP18615 380 aaKnown RBP7.03□□□□□ -1.28
GYPB-206ENST00000506516 HIST1H2ADP20671 130 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 MCM3P25205 808 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 STX2P32856 288 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 ETV5P41161 510 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 IL2P60568 153 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 CUL1Q13616 776 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 GBX1Q14549 363 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 KIR2DS3Q14952 304 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 HECTD2Q5U5R9 776 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 BROXQ5VW32 411 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 PAQR3Q6TCH7 311 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 CYHR1Q6ZMK1 362 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 CTAGE3PQ8IX95 158 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 CPNE9Q8IYJ1 553 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 MYO1HQ8N1T3 1032 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 BMPERQ8N8U9 685 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 OR9A1PQ8NGU1 263 aa7.03□□□□□ -1.28
GYPB-206ENST00000506516 CD200R1Q8TD46 325 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms