RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 WRAP53Q9BUR4 548 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 RMND5AQ9H871 391 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 MBD1Q9UIS9 605 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 CNOT6Q9ULM6 557 aaKnown RBP16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 PCDHB3Q9Y5E6 796 aa16.82■□□□□ 0.28
TRAPPC11-204ENST00000505676 DENND4AQ7Z401 1863 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 H3BM21 787 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 RNASEH2AO75792 299 aaKnown RBP16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 PDYNP01213 254 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 GRIA3P42263 894 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 CASP2P42575 452 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 CTSCP53634 463 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 RPS14P62263 151 aaKnown RBP16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 IRF8Q02556 426 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 FAM109BQ6ICB4 259 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 GRHL2Q6ISB3 625 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 VITQ6UXI7 678 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 DLEU7Q6UYE1 221 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 LILRA2Q8N149 483 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 LIX1Q8N485 282 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ZNF366Q8N895 744 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ANKFN1Q8N957 763 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 TESCQ96BS2 214 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 REPS1Q96D71 796 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ZFYVE19Q96K21 471 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 BRF2Q9HAW0 419 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ITM2CQ9NQX7 267 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 SLC22A14Q9Y267 594 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 H0YIV9 168 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ARPC2O15144 300 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 SMNDC1O75940 238 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 SOD1P00441 154 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 BMP2P12643 396 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 TEAD1P28347 426 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 OPRD1P41143 372 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 RPA4Q13156 261 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 E2F2Q14209 437 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 MAPKAPK3Q16644 382 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 LRRC36Q1X8D7 754 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 RAET1GQ6H3X3 334 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 AGTRAPQ6RW13 159 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ADAMTSL4Q6UY14 1074 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ERMP1Q7Z2K6 904 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 THOC6Q86W42 341 aaKnown RBP16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 KIAA2013Q8IYS2 634 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 DNAJB14Q8TBM8 379 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 HM13Q8TCT9 377 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ELSPBP1Q96BH3 223 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 MRPL38Q96DV4 380 aaKnown RBP16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 STOX2Q9P2F5 926 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 ITM2BQ9Y287 266 aa16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 DNMT3AQ9Y6K1 912 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC11-204ENST00000505676 A6NHS1 94 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 ERN1O75460 977 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 GMNNO75496 209 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 APODP05090 189 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 ATP6V1B2P21281 511 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 HALP42357 657 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 HMGCS1Q01581 520 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 CHIT1Q13231 466 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 SHHQ15465 462 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 POM121L1PQ3SYA9 428 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 PPP2R2DQ66LE6 453 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 FKBP9P1Q75LS8 142 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 MARVELD2Q8N4S9 558 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 BEND7Q8N7W2 519 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 EME1Q96AY2 570 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 CCDC115Q96NT0 180 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 GPR89AB7ZAQ6 455 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 C9JVG2 144 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 RNASEH1O60930 286 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 KAT7O95251 611 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 PGRP06401 933 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 GPR89BP0CG08 455 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 BCKDHAP12694 445 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 HLA-EP13747 358 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 PSMC3P17980 439 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 GJA4P35212 333 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 C21orf58P58505 322 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 AGERQ15109 404 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 TANGO2Q6ICL3 276 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 ANKRD54Q6NXT1 300 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 TMEM154Q6P9G4 183 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 SLC2A7Q6PXP3 512 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 UNC5DQ6UXZ4 953 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 CYP2R1Q6VVX0 501 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 PAPD5Q8NDF8 572 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 HBEGFQ99075 208 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 FARSBQ9NSD9 589 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 MAN2B2Q9Y2E5 1009 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 PCDHGA11Q9Y5H2 935 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 FADS3Q9Y5Q0 445 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 KCNE2Q9Y6J6 123 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 C2orf16Q68DN1 1984 aa16.8■□□□□ 0.28
TRAPPC11-204ENST00000505676 OTOL1A6NHN0 477 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 LILRB5O75023 590 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 ADH1BP00325 375 aa16.79■□□□□ 0.28
TRAPPC11-204ENST00000505676 C7P10643 843 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms