RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ZC3H7AQ8IWR0 971 aaKnown RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 CHDHQ8NE62 594 aaPredicted RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 FBXO30Q8TB52 745 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 RAB2BQ8WUD1 216 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 SLC47A1Q96FL8 570 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 SH3GL1Q99961 368 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 THUMPD3Q9BV44 507 aaKnown RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 SMURF2Q9HAU4 748 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 FARSBQ9NSD9 589 aaKnown RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 TRPS1Q9UHF7 1281 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 GNPTGQ9UJJ9 305 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 UTS2RQ9UKP6 389 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 AP3M1Q9Y2T2 418 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 PRSS21Q9Y6M0 314 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 TRBV5-4A0A0C4DH59 114 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 GSTA4O15217 222 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 GUCA1CO95843 209 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 RETP07949 1114 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 HTR1AP08908 422 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 HNRNPA1P09651 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
LIN54-204ENST00000505397 ZNF182P17025 639 aaPredicted RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 PIGAP37287 484 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 GNPDA1P46926 289 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 RGS4P49798 205 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 PHKG1Q16816 387 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 PLEKHG6Q3KR16 790 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 SPANXN4Q5MJ08 99 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 C6orf141Q5SZD1 244 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 LAIR2Q6ISS4 152 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 SPRED2Q7Z698 418 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 GPR149Q86SP6 731 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 USP7Q93009 1102 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 RBM4BQ9BQ04 359 aaKnown RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 RBM4Q9BWF3 364 aaKnown RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 DPY30Q9C005 99 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 TDP1Q9NUW8 608 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 DCAF13Q9NV06 445 aaKnown RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 LIMD1Q9UGP4 676 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 DPP7Q9UHL4 492 aa16.54■□□□□ 0.24
LIN54-204ENST00000505397 TSR3Q9UJK0 312 aaKnown RBP16.54■□□□□ 0.24
LIN54-204ENST00000505397 MYOFQ9NZM1 2061 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 CXCR6O00574 342 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 NOL3O60936 208 aaKnown RBP16.53■□□□□ 0.24
LIN54-204ENST00000505397 PGLSO95336 258 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 PRAMEF1O95521 474 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 ALPIP09923 528 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 IL1RNP18510 177 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 DGKAP23743 735 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 CD70P32970 193 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 GZMMP51124 257 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 GPRC6AQ5T6X5 926 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 SUSD1Q6UWL2 747 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 CALHM3Q86XJ0 350 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 RBFAQ8N0V3 343 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 LIX1Q8N485 282 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 SDCCAG3Q96C92 435 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 CSF3RQ99062 836 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 MAGIXQ9H6Y5 334 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 KAT8Q9H7Z6 458 aaKnown RBP16.53■□□□□ 0.24
LIN54-204ENST00000505397 ACTR8Q9H981 624 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.53■□□□□ 0.24
LIN54-204ENST00000505397 PSME2Q9UL46 239 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 CLEC4EQ9ULY5 219 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 K7ERQ8 282 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 EBLN1P0CF75 366 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 MYOGP15173 224 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 IL7RP16871 459 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 CTPS1P17812 591 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 UGT1A1P22309 533 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 UGT1A4P22310 534 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 UGT1A3P35503 534 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 UGT1A5P35504 534 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 GDF5P43026 501 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 USP39Q53GS9 565 aaKnown RBP16.53■□□□□ 0.24
LIN54-204ENST00000505397 FAM151BQ6UXP7 276 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 SNX20Q7Z614 316 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 HS3ST5Q8IZT8 346 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 SGCDQ92629 289 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 NRBF2Q96F24 287 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 PLEKHA8Q96JA3 519 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 MAGED4Q96JG8 741 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 PALMDQ9NP74 551 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 LTB4R2Q9NPC1 389 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 OPTCQ9UBM4 332 aa16.53■□□□□ 0.24
LIN54-204ENST00000505397 ZNF106Q9H2Y7 1883 aaKnown RBP16.53■□□□□ 0.24
LIN54-204ENST00000505397 C16orf96A6NNT2 1141 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 AREL1O15033 823 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 ULK1O75385 1050 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 PRKD3O94806 890 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 SLC25A14O95258 325 aaPredicted RBP16.52■□□□□ 0.24
LIN54-204ENST00000505397 MAP4P27816 1152 aaKnown RBP16.52■□□□□ 0.24
LIN54-204ENST00000505397 MAPK8P45983 427 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 BMXP51813 675 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 HMGCS1Q01581 520 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 NFATC2Q13469 925 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 PON2Q15165 354 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 CTU2Q2VPK5 515 aaKnown RBP16.52■□□□□ 0.24
LIN54-204ENST00000505397 ARMC12Q5T9G4 340 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 CACHD1Q5VU97 1274 aa16.52■□□□□ 0.24
LIN54-204ENST00000505397 ATG9BQ674R7 924 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms