RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 RIMKLBQ9ULI2 386 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 NFS1Q9Y697 457 aa12.67□□□□□ -0.38
DDX41-204ENST00000504807 SNRNP200O75643 2136 aaKnown RBP12.67□□□□□ -0.38
DDX41-204ENST00000504807 GOLGA8KD6RF30 607 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 E7EVH7 732 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 GOLGA8TH3BQL2 631 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 MATN2O00339 956 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 KRT86O43790 486 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 AVILO75366 819 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 RFPL1O75677 317 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 RECKO95980 971 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 MGAT1P26572 445 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 AOAHP28039 575 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 GCGRP47871 477 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 YBX1P67809 324 aaKnown RBP12.66□□□□□ -0.38
DDX41-204ENST00000504807 HSPA14Q0VDF9 509 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 TRIP13Q15645 432 aaPredicted RBP12.66□□□□□ -0.38
DDX41-204ENST00000504807 TMTC4Q5T4D3 741 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 C1orf189Q5VU69 101 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 DRICH1Q6PGQ1 229 aaPredicted RBP12.66□□□□□ -0.38
DDX41-204ENST00000504807 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 SYVN1Q86TM6 617 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 TAX1BP1Q86VP1 789 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 MCEMP1Q8IX19 187 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 TBC1D21Q8IYX1 336 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 AGGF1Q8N302 714 aaeCLIP12.66□□□□□ -0.38
DDX41-204ENST00000504807 DNAJC22Q8N4W6 341 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 ZBTB2Q8N680 514 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 OR8K5Q8NH50 307 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 CPT1BQ92523 772 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 LRRC45Q96CN5 670 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 CLIP3Q96DZ5 547 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 MFSD3Q96ES6 412 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 SGSM3Q96HU1 749 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 FRMD8P1Q9BZ68 369 aaPredicted RBP12.66□□□□□ -0.38
DDX41-204ENST00000504807 TSGA10Q9BZW7 698 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 SYNPO2LQ9H987 977 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 ACTR5Q9H9F9 607 aaPredicted RBP12.66□□□□□ -0.38
DDX41-204ENST00000504807 MLXIPLQ9NP71 852 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 SLC22A11Q9NSA0 550 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 IL1RAPL1Q9NZN1 696 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 PAK5Q9P286 719 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 DHCR7Q9UBM7 475 aaKnown RBP12.66□□□□□ -0.38
DDX41-204ENST00000504807 TCFL5Q9UL49 500 aa12.66□□□□□ -0.38
DDX41-204ENST00000504807 TTC7AQ9ULT0 858 aaPredicted RBP12.66□□□□□ -0.38
DDX41-204ENST00000504807 KLF7O75840 302 aaPredicted RBP12.65□□□□□ -0.38
DDX41-204ENST00000504807 TMEM63AO94886 807 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 MED26O95402 600 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 GSTM1P09488 218 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 OR56A5P0C7T3 313 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 CYP2A7P20853 494 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 MAGP20916 626 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 SHMT2P34897 504 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 BDKRB1P46663 353 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 BASP1P80723 227 aaKnown RBP12.65□□□□□ -0.38
DDX41-204ENST00000504807 GSTM4Q03013 218 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 SLC9A5Q14940 896 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 INPP5JQ15735 1006 aaPredicted RBP12.65□□□□□ -0.38
DDX41-204ENST00000504807 KYNUQ16719 465 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 SYTL3Q4VX76 610 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 PCID2Q5JVF3 399 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 FCRL6Q6DN72 434 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 CYB5D1Q6P9G0 228 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 LRRC8AQ8IWT6 810 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 CCDC89Q8N998 374 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 DENND1AQ8TEH3 1009 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 FAM136AQ96C01 138 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 BIRC8Q96P09 236 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 GBP5Q96PP8 586 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 ALS2CR12Q96Q35 445 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 NLNQ9BYT8 704 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 EIF2B3Q9NR50 452 aaKnown RBP12.65□□□□□ -0.38
DDX41-204ENST00000504807 CATSPERZQ9NTU4 200 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 LUZP4Q9P127 313 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
DDX41-204ENST00000504807 SLC5A6Q9Y289 635 aa12.65□□□□□ -0.38
DDX41-204ENST00000504807 DRG1Q9Y295 367 aaKnown RBP12.65□□□□□ -0.38
DDX41-204ENST00000504807 A0A0J9YY10 115 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 E7EQ34 232 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 CD3EAPO15446 510 aaKnown RBP12.64□□□□□ -0.39
DDX41-204ENST00000504807 PRICKLE3O43900 615 aaPredicted RBP12.64□□□□□ -0.39
DDX41-204ENST00000504807 CEP104O60308 925 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 CEACAM4O75871 244 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 SLCO2B1O94956 709 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 RAB40ALP0C0E4 278 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 MCM3P25205 808 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 PSMB5P28074 263 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 CCL11P51671 97 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 GSDMDP57764 484 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 RPS15P62841 145 aaKnown RBP12.64□□□□□ -0.39
DDX41-204ENST00000504807 PRAMEP78395 509 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 ATP1A4Q13733 1029 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 KCNJ11Q14654 390 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 NCF4Q15080 339 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 ZXDCQ2QGD7 858 aaPredicted RBP12.64□□□□□ -0.39
DDX41-204ENST00000504807 FASTKD1Q53R41 847 aaKnown RBP12.64□□□□□ -0.39
DDX41-204ENST00000504807 PPHLN1Q8NEY8 458 aaKnown RBP12.64□□□□□ -0.39
DDX41-204ENST00000504807 CFAP61Q8NHU2 1237 aa12.64□□□□□ -0.39
DDX41-204ENST00000504807 MS4A14Q96JA4 679 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms