RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PARVBQ9HBI1 364 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ZBTB26Q9HCK0 441 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SSU72Q9NP77 194 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SIRPGQ9P1W8 387 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 STOX2Q9P2F5 926 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 TXNDC16Q9P2K2 825 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CIDEBQ9UHD4 219 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PTBP2Q9UKA9 531 aaKnown RBP4.79□□□□□ -1.64
LMNB1-208ENST00000504788 PLAGL1Q9UM63 463 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 SH2B3Q9UQQ2 575 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 ACTL7BQ9Y614 415 aa4.79□□□□□ -1.64
LMNB1-208ENST00000504788 CEP295Q9C0D2 2601 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NPEPPSL1A6NEC2 478 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 OR5K3A6NET4 321 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 KIF1CO43896 1103 aaKnown RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 PLIN3O60664 434 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 KCNK5O95279 499 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 LDOC1O95751 146 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 TBX6O95947 436 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 C8GP07360 202 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 ENO2P09104 434 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SLC2A4P14672 509 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NPPBP16860 134 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 TFEBP19484 476 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NDUFS1P28331 727 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 GCGRP47871 477 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 GLRBP48167 497 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 RPIAP49247 311 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 RGS4P49798 205 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SLC18A1P54219 525 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 GFERP55789 205 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 CLDN6P56747 220 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SNRPNP63162 240 aaKnown RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NFKB2Q00653 900 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 ILKQ13418 452 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 ARHGAP19Q14CB8 494 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SUZ12Q15022 739 aaKnown RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 TMED2Q15363 201 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NR0B2Q15466 257 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 TRIP6Q15654 476 aaKnown RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 ZIC1Q15915 447 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 KRT71Q3SY84 523 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SYTL3Q4VX76 610 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 CDKL4Q5MAI5 379 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 CEP85LQ5SZL2 805 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NKAIN2Q5VXU1 208 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 FAM219BQ5XKK7 198 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 WDR74Q6RFH5 385 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 UBE2R2Q712K3 238 aaPredicted RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 EFL1Q7Z2Z2 1120 aaKnown RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 B3GNT8Q7Z7M8 397 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SLC9B2Q86UD5 537 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 LCA5Q86VQ0 697 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 CNPY4Q8N129 248 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 C4orf33Q8N1A6 199 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 ARHGEF39Q8N4T4 335 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 BMPERQ8N8U9 685 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 PPFIBP2Q8ND30 876 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 OR6C4Q8NGE1 309 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 OR9A1PQ8NGU1 263 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 OR2L8Q8NGY9 312 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 IFI44Q8TCB0 444 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 UBTD2Q8WUN7 234 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NAT6Q93015 286 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 RAD51AP1Q96B01 352 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 FBXL8Q96CD0 374 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 MOCOSQ96EN8 888 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 KCNK17Q96T54 332 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NUDT22Q9BRQ3 303 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 HGH1Q9BTY7 390 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 TRIT1Q9H3H1 467 aaKnown RBP4.78□□□□□ -1.64
LMNB1-208ENST00000504788 XKR8Q9H6D3 395 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 ALG9Q9H6U8 611 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 PCMTD2Q9NV79 361 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 FAM53CQ9NYF3 392 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 OR6C2Q9NZP2 312 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 COPG2Q9UBF2 871 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 XPR1Q9UBH6 696 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 ZNF225Q9UK10 706 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 POMT2Q9UKY4 750 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 GRID1Q9ULK0 1009 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 PLLPQ9Y342 182 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 HEBP2Q9Y5Z4 205 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 NCOR2Q9Y618 2525 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SEC16AO15027 2179 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SDK2Q58EX2 2172 aa4.78□□□□□ -1.64
LMNB1-208ENST00000504788 SPENQ96T58 3664 aaKnown RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 IGHV5-10-1A0A0J9YXX1 117 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SPAARA0A1B0GVQ0 90 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 TLDC2A0PJX2 215 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 LRRC14BA6NHZ5 514 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 SMIM23A6NLE4 172 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 D6RAR5 112 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 F8W8V4 182 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 UBXN8O00124 270 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 IFRD1O00458 451 aaPredicted RBP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 E2F3O00716 465 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PPP6CO00743 305 aa4.77□□□□□ -1.65
LMNB1-208ENST00000504788 PRPF4O43172 522 aaKnown RBP eCLIP4.77□□□□□ -1.65
LMNB1-208ENST00000504788 OPA1O60313 960 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms