RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PYCR2Q96C36 320 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 C3orf30Q96M34 536 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 IL17FQ96PD4 163 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 CDK15Q96Q40 435 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 EGFL8Q99944 293 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 SIKE1Q9BRV8 207 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 HGH1Q9BTY7 390 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 NTMT1Q9BV86 223 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 LRRC61Q9BV99 259 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 ATG10Q9H0Y0 220 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 NOL11Q9H8H0 719 aaKnown RBP10.09□□□□□ -0.79
TPM3-217ENST00000504663 MEAF6Q9HAF1 191 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 MID1IP1Q9NPA3 183 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 ZNF624Q9P2J8 865 aaPredicted RBP10.09□□□□□ -0.79
TPM3-217ENST00000504663 TRAF6Q9Y4K3 522 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 DNAJC15Q9Y5T4 150 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 DMDP11532 3685 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 AZIN1O14977 448 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 PRICKLE3O43900 615 aaPredicted RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 CCNT2O60583 730 aaKnown RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 NDUFS2O75306 463 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 OR4F21O95013 312 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 S100BP04271 92 aaPredicted RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 SLC35G4P0C7Q5 338 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 PRR35P0CG20 571 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 MTHFD1P11586 935 aaKnown RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 NME1P15531 152 aaKnown RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 ITPKAP23677 461 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 HTR1BP28222 390 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 CD38P28907 300 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 SERPINB3P29508 390 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 PEBP1P30086 187 aaKnown RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 PKLRP30613 574 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 PKNOX1P55347 436 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 TCEA2Q15560 299 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 PDCD2Q16342 344 aaPredicted RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 CYP2A13Q16696 494 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 ZNF423Q2M1K9 1284 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 GGTA1PQ4G0N0 100 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 ZNF542PQ5EBM4 170 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 PEAR1Q5VY43 1037 aaPredicted RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 DNAJC14Q6Y2X3 702 aaPredicted RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 RNF165Q6ZSG1 346 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 GPRIN3Q6ZVF9 776 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 ARMCX6Q7L4S7 300 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 HID1Q8IV36 788 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 C1orf210Q8IVY1 113 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 TBC1D21Q8IYX1 336 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 PHACTR4Q8IZ21 702 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 FITM2Q8N6M3 262 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 HMGCLL1Q8TB92 370 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 PPP4R1Q8TF05 950 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 GAB3Q8WWW8 586 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 KLHDC7BQ96G42 594 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 C12orf66Q96MD2 445 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 NUF2Q9BZD4 464 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 SLC32A1Q9H598 525 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 STN1Q9H668 368 aaKnown RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 IPPKQ9H8X2 491 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 EML4Q9HC35 981 aaKnown RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 C11orf16Q9NQ32 467 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 AASDHPPTQ9NRN7 309 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 SPATA7Q9P0W8 599 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 OPTCQ9UBM4 332 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 MOSPD1Q9UJG1 213 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 ICKQ9UPZ9 632 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 ASF1AQ9Y294 204 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 CCL27Q9Y4X3 112 aa10.08□□□□□ -0.8
TPM3-217ENST00000504663 TDRD6O60522 2096 aaKnown RBP10.08□□□□□ -0.8
TPM3-217ENST00000504663 ATXN2Q99700 1313 aaKnown RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 GON4LQ3T8J9 2241 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 MEI4A8MW99 385 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 TLR4O00206 839 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 HRO43593 1189 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 SKAP2O75563 359 aaPredicted RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 WFS1O76024 890 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 WDR47O94967 919 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 RASGRP1O95267 797 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 MLYCDO95822 493 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 CSF2P04141 144 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 CD1EP15812 388 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 IDSP22304 550 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 ACTR1BP42025 376 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 PNLIPRP1P54315 467 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 ACTR1AP61163 376 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 UBE2IP63279 158 aaKnown RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 YBX1P67809 324 aaKnown RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 NAE1Q13564 534 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 PTK2BQ14289 1009 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 SHBQ15464 509 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 ZSCAN26Q16670 478 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 LSM12Q3MHD2 195 aaKnown RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 PLK5Q496M5 336 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 GALNTL6Q49A17 601 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 FAM91A1Q658Y4 838 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 BMP8AQ7Z5Y6 402 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 THOC6Q86W42 341 aaKnown RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 DCP2Q8IU60 420 aaKnown RBP10.07□□□□□ -0.8
TPM3-217ENST00000504663 CLYBLQ8N0X4 340 aa10.07□□□□□ -0.8
TPM3-217ENST00000504663 L3MBTL4Q8NA19 623 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms