RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 PCBP2Q15366 365 aaKnown RBP eCLIP9.96□□□□□ -0.82
USP17L28-201ENST00000504543 RSPO4Q2I0M5 234 aaPredicted RBP9.96□□□□□ -0.82
USP17L28-201ENST00000504543 LDLRAP1Q5SW96 308 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 TTC23LQ6PF05 361 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 NEK10Q6ZWH5 1172 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 CHSY3Q70JA7 882 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 CLDN19Q8N6F1 224 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 PLA2G15Q8NCC3 412 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 OR56A4Q8NGH8 313 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 BAHD1Q8TBE0 780 aaPredicted RBP9.96□□□□□ -0.82
USP17L28-201ENST00000504543 HIC2Q96JB3 615 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 ZNF382Q96SR6 550 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 CDC6Q99741 560 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 MYOCQ99972 504 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 DUSP23Q9BVJ7 150 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 RIOK2Q9BVS4 552 aaKnown RBP9.96□□□□□ -0.82
USP17L28-201ENST00000504543 CADM1Q9BY67 442 aaKnown RBP9.96□□□□□ -0.82
USP17L28-201ENST00000504543 SHCBP1LQ9BZQ2 653 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 SLC32A1Q9H598 525 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 WDR55Q9H6Y2 383 aaPredicted RBP9.96□□□□□ -0.82
USP17L28-201ENST00000504543 TNFRSF12AQ9NP84 129 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 TRNAU1APQ9NX07 287 aaKnown RBP9.96□□□□□ -0.82
USP17L28-201ENST00000504543 CD274Q9NZQ7 290 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 SPASTQ9UBP0 616 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 TMPRSS11EQ9UL52 423 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 LRP4O75096 1905 aa9.96□□□□□ -0.82
USP17L28-201ENST00000504543 B2RBV5 119 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 E2F3O00716 465 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 SCAMP1O15126 338 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 GSC2O15499 205 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 FFAR2O15552 330 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 NUAK1O60285 661 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 CBFA2T3O75081 653 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 VPS4BO75351 444 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 SKAP2O75563 359 aaPredicted RBP9.95□□□□□ -0.82
USP17L28-201ENST00000504543 TRIM16O95361 564 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 TNFP01375 233 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 PCCBP05166 539 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 MPC1LP0DKB6 136 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 CDK4P11802 303 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 ATP1B2P14415 290 aaPredicted RBP9.95□□□□□ -0.82
USP17L28-201ENST00000504543 AOAHP28039 575 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 PKNOX1P55347 436 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 SRP54P61011 504 aaKnown RBP9.95□□□□□ -0.82
USP17L28-201ENST00000504543 SH3BP2P78314 561 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 CDKL1Q00532 357 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 UGT3A2Q3SY77 523 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 WASHC2DQ5SRD0 308 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 PLEKHS1Q5SXH7 462 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 TPRG1LQ5T0D9 272 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 RAET1GQ6H3X3 334 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 LAYNQ6UX15 382 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 RINLQ6ZS11 566 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 RFLNAQ6ZTI6 216 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 RPS27LQ71UM5 84 aaKnown RBP9.95□□□□□ -0.82
USP17L28-201ENST00000504543 PACS2Q86VP3 889 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 HEATR4Q86WZ0 1026 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 FAM181AQ8N9Y4 354 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 RBM15BQ8NDT2 890 aaKnown RBP9.95□□□□□ -0.82
USP17L28-201ENST00000504543 SCAMP4Q969E2 229 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 MCUR1Q96AQ8 359 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 C19orf60Q96EN9 201 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 DCUN1D1Q96GG9 259 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 CCT7Q99832 543 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 IL21RQ9HBE5 538 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 ZBTB26Q9HCK0 441 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 MID1IP1Q9NPA3 183 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 KLQ9UEF7 1012 aa9.95□□□□□ -0.82
USP17L28-201ENST00000504543 CNOT6Q9ULM6 557 aaKnown RBP9.95□□□□□ -0.82
USP17L28-201ENST00000504543 CNOT1A5YKK6 2376 aaKnown RBP9.94□□□□□ -0.82
USP17L28-201ENST00000504543 KLHL33A6NCF5 533 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 LMO7DNF2Z398 122 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 K7ESM1 405 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 VEGFDO43915 354 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 KCNJ13O60928 360 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 ATP6V1G2O95670 118 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 ESRRBO95718 433 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 FTH1P02794 183 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 CEACAM5P06731 702 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 C8GP07360 202 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 UROSP10746 265 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 COX4I1P13073 169 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 EZRP15311 586 aaKnown RBP9.94□□□□□ -0.82
USP17L28-201ENST00000504543 JUNDP17535 347 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 VCLP18206 1134 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 PIK3R1P27986 724 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 AKT1P31749 480 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 CPOXP36551 454 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 MAPK9P45984 424 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 CLCNKAP51800 687 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 RAP1GDS1P52306 607 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 LRP8Q14114 963 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 SQLEQ14534 574 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 ELOCQ15369 112 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 SNCBQ16143 134 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 ALG11Q2TAA5 492 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 ACSBG2Q5FVE4 666 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 CYHR1Q6ZMK1 362 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 NAXDQ8IW45 347 aa9.94□□□□□ -0.82
USP17L28-201ENST00000504543 PHACTR4Q8IZ21 702 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms