RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 N4BP2L2Q92802 583 aaPredicted RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 INPP5DQ92835 1189 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 MVB12AQ96EY5 273 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 DNAJC1Q96KC8 554 aaKnown RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 AGAP4Q96P64 663 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 SPSB2Q99619 263 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 SLX1AQ9BQ83 275 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 FRMD8P1Q9BZ68 369 aaPredicted RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 SPRTNQ9H040 489 aaPredicted RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 ILKAPQ9H0C8 392 aaPredicted RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 CASS4Q9NQ75 786 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 SLC22A11Q9NSA0 550 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 TXLNGQ9NUQ3 528 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 IFT80Q9P2H3 777 aaPredicted RBP5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 ENTPD4Q9Y227 616 aa5.87□□□□□ -1.47
LSM3P4-201ENST00000502948 UTP20O75691 2785 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ITPR2Q14571 2701 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ZGRF1Q86YA3 2104 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 A0A1B0GUH1 482 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 A6NL46 340 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 AP3B1O00203 1094 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 SOCS6O14544 535 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 RASGRF2O14827 1237 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 HCRTR1O43613 425 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 STSP08842 583 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 TNNT1P13805 278 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 PVRP15151 417 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ADRA1DP25100 572 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 PEBP1P30086 187 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 PKLRP30613 574 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 OTX2P32243 289 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 CARSP49589 748 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 CDKN1CP49918 316 aaPredicted RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ADARP55265 1226 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 AP2B1P63010 937 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 PRKG2Q13237 762 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 GRB7Q14451 532 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ZNF169Q14929 603 aaPredicted RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 NKG7Q16617 165 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 TUBB8Q3ZCM7 444 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 PRR30Q53SZ7 412 aaPredicted RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 AARS2Q5JTZ9 985 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 AFTPHQ6ULP2 937 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 KIRREL2Q6UWL6 708 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ARHGEF18Q6ZSZ5 1173 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 TAS2R42Q7RTR8 314 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 CUZD1Q86UP6 607 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 LRRC6Q86X45 466 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 MCATQ8IVS2 390 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 SYCE1Q8N0S2 351 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 TXLNBQ8N3L3 684 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 MPP5Q8N3R9 675 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 CISD2Q8N5K1 135 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ZNF655Q8N720 491 aaPredicted RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 LRRC57Q8N9N7 239 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 LMNTD1Q8N9Z9 388 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 OR13J1Q8NGT2 312 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 MAGEC3Q8TD91 643 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 FAR1Q8WVX9 515 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 RELTQ969Z4 430 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 RAD51AP1Q96B01 352 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 C19orf60Q96EN9 201 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 ALS2CR12Q96Q35 445 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 PANX2Q96RD6 677 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 APOL2Q9BQE5 337 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 HGH1Q9BTY7 390 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 HEMGNQ9BXL5 484 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 LHPPQ9H008 270 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 RNF32Q9H0A6 362 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 GOLPH3Q9H4A6 298 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 FAM96AQ9H5X1 160 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 RUBCNLQ9H714 662 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 SLC6A20Q9NP91 592 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 SPHK1Q9NYA1 384 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 SMARCAL1Q9NZC9 954 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 DHCR7Q9UBM7 475 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 CDYLQ9Y232 598 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 HS3ST3B1Q9Y662 390 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 EPN1Q9Y6I3 576 aaPredicted RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 MDC1Q14676 2089 aaKnown RBP5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 HEATR5BQ9P2D3 2071 aa5.86□□□□□ -1.47
LSM3P4-201ENST00000502948 MYO9AB2RTY4 2548 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 CCDC78A2IDD5 438 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ISM1B1AKI9 464 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 E2F3O00716 465 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 HNRNPRO43390 633 aaKnown RBP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 KRT86O43790 486 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 IPO7O95373 1038 aaKnown RBP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 METTL18O95568 372 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 GAS8O95995 478 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 HPP00738 406 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 APOA4P06727 396 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ERGP11308 486 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 MAGP20916 626 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 RPS3P23396 243 aaKnown RBP eCLIP5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 AOAHP28039 575 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 ATP5DP30049 168 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 CCR7P32248 378 aa5.85□□□□□ -1.47
LSM3P4-201ENST00000502948 FDFT1P37268 417 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms