RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 GINS2Q9Y248 185 aa3.01□□□□□ -1.93
PROM1-203ENST00000502943 ZFP37Q9Y6Q3 630 aaPredicted RBP3.01□□□□□ -1.93
PROM1-203ENST00000502943 NBEAQ8NFP9 2946 aa3.01□□□□□ -1.93
PROM1-203ENST00000502943 ATG2AQ2TAZ0 1938 aa3.01□□□□□ -1.93
PROM1-203ENST00000502943 URB1O60287 2271 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 PHLPP2Q6ZVD8 1323 aa3□□□□□ -1.93
PROM1-203ENST00000502943 SPTA1P02549 2419 aa3□□□□□ -1.93
PROM1-203ENST00000502943 A0A087WWV3 80 aa3□□□□□ -1.93
PROM1-203ENST00000502943 A0A087X002 238 aa3□□□□□ -1.93
PROM1-203ENST00000502943 FAM237AA0A1B0GTK4 181 aa3□□□□□ -1.93
PROM1-203ENST00000502943 FAM90A20PA6NIJ5 464 aa3□□□□□ -1.93
PROM1-203ENST00000502943 ANHXE9PGG2 379 aa3□□□□□ -1.93
PROM1-203ENST00000502943 H3BQV1 296 aa3□□□□□ -1.93
PROM1-203ENST00000502943 SH2B2O14492 632 aaPredicted RBP3□□□□□ -1.93
PROM1-203ENST00000502943 RTL8CO15255 209 aa3□□□□□ -1.93
PROM1-203ENST00000502943 ARHGEF9O43307 516 aa3□□□□□ -1.93
PROM1-203ENST00000502943 ATP8B1O43520 1251 aa3□□□□□ -1.93
PROM1-203ENST00000502943 RPS6KA5O75582 802 aa3□□□□□ -1.93
PROM1-203ENST00000502943 KRT38O76015 456 aa3□□□□□ -1.93
PROM1-203ENST00000502943 METTL18O95568 372 aa3□□□□□ -1.93
PROM1-203ENST00000502943 PRSS56P0CW18 603 aa3□□□□□ -1.93
PROM1-203ENST00000502943 PNMA6AP0CW24 399 aaPredicted RBP3□□□□□ -1.93
PROM1-203ENST00000502943 ZNF26P17031 533 aaPredicted RBP3□□□□□ -1.93
PROM1-203ENST00000502943 S1PR1P21453 382 aa3□□□□□ -1.93
PROM1-203ENST00000502943 PDIA3P30101 505 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 HOXC8P31273 242 aa3□□□□□ -1.93
PROM1-203ENST00000502943 PBX3P40426 434 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TDO2P48775 406 aa3□□□□□ -1.93
PROM1-203ENST00000502943 METAP2P50579 478 aaKnown RBP eCLIP3□□□□□ -1.93
PROM1-203ENST00000502943 CLCN4P51793 760 aa3□□□□□ -1.93
PROM1-203ENST00000502943 NDUFA8P51970 172 aa3□□□□□ -1.93
PROM1-203ENST00000502943 MRPS6P82932 125 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 CREB5Q02930 508 aa3□□□□□ -1.93
PROM1-203ENST00000502943 MGAT3Q09327 533 aa3□□□□□ -1.93
PROM1-203ENST00000502943 PPFIA1Q13136 1202 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TBX2Q13207 712 aaPredicted RBP3□□□□□ -1.93
PROM1-203ENST00000502943 HTR4Q13639 388 aa3□□□□□ -1.93
PROM1-203ENST00000502943 NEDD9Q14511 834 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TMEM187Q14656 261 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TMEM266Q2M3C6 531 aa3□□□□□ -1.93
PROM1-203ENST00000502943 SOWAHAQ2M3V2 549 aa3□□□□□ -1.93
PROM1-203ENST00000502943 DPCR1Q3MIW9 517 aa3□□□□□ -1.93
PROM1-203ENST00000502943 ZFP69Q49AA0 526 aa3□□□□□ -1.93
PROM1-203ENST00000502943 SIRPB2Q5JXA9 342 aa3□□□□□ -1.93
PROM1-203ENST00000502943 CYP26C1Q6V0L0 522 aa3□□□□□ -1.93
PROM1-203ENST00000502943 CCDC73Q6ZRK6 1079 aa3□□□□□ -1.93
PROM1-203ENST00000502943 FAM43BQ6ZT52 329 aaPredicted RBP3□□□□□ -1.93
PROM1-203ENST00000502943 TPRG1Q6ZUI0 275 aa3□□□□□ -1.93
PROM1-203ENST00000502943 MTSS1LQ765P7 747 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TMEM139Q8IV31 216 aa3□□□□□ -1.93
PROM1-203ENST00000502943 CHERPQ8IWX8 916 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 CEP57L1Q8IYX8 460 aa3□□□□□ -1.93
PROM1-203ENST00000502943 C1orf87Q8N0U7 546 aa3□□□□□ -1.93
PROM1-203ENST00000502943 LRRC43Q8N309 656 aa3□□□□□ -1.93
PROM1-203ENST00000502943 NME8Q8N427 588 aa3□□□□□ -1.93
PROM1-203ENST00000502943 ZNF843Q8N446 348 aa3□□□□□ -1.93
PROM1-203ENST00000502943 CHCHD4Q8N4Q1 142 aa3□□□□□ -1.93
PROM1-203ENST00000502943 PARP16Q8N5Y8 322 aa3□□□□□ -1.93
PROM1-203ENST00000502943 STPG4Q8N801 248 aa3□□□□□ -1.93
PROM1-203ENST00000502943 AMER3Q8N944 861 aa3□□□□□ -1.93
PROM1-203ENST00000502943 LINC00301Q8NCQ3 95 aa3□□□□□ -1.93
PROM1-203ENST00000502943 LSM14AQ8ND56 463 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 DEFB124Q8NES8 71 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TRIM58Q8NG06 486 aa3□□□□□ -1.93
PROM1-203ENST00000502943 FAM71BQ8TC56 605 aa3□□□□□ -1.93
PROM1-203ENST00000502943 NCSTNQ92542 709 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TM9SF4Q92544 642 aa3□□□□□ -1.93
PROM1-203ENST00000502943 FGF14Q92915 247 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TIGD1Q96MW7 591 aa3□□□□□ -1.93
PROM1-203ENST00000502943 XPO4Q9C0E2 1151 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 UBA5Q9GZZ9 404 aa3□□□□□ -1.93
PROM1-203ENST00000502943 NAT10Q9H0A0 1025 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 TMEM117Q9H0C3 514 aa3□□□□□ -1.93
PROM1-203ENST00000502943 FAM49AQ9H0Q0 323 aaPredicted RBP3□□□□□ -1.93
PROM1-203ENST00000502943 RANBP17Q9H2T7 1088 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 PCDH9Q9HC56 1237 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TMEM9BQ9NQ34 198 aa3□□□□□ -1.93
PROM1-203ENST00000502943 RGS18Q9NS28 235 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TMEM161AQ9NX61 479 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TRMT1Q9NXH9 659 aaKnown RBP3□□□□□ -1.93
PROM1-203ENST00000502943 IFNKQ9P0W0 207 aa3□□□□□ -1.93
PROM1-203ENST00000502943 ORC3Q9UBD5 711 aaPredicted RBP3□□□□□ -1.93
PROM1-203ENST00000502943 NOL12Q9UGY1 213 aaKnown RBP eCLIP3□□□□□ -1.93
PROM1-203ENST00000502943 MAD2L2Q9UI95 211 aa3□□□□□ -1.93
PROM1-203ENST00000502943 TUBE1Q9UJT0 475 aa3□□□□□ -1.93
PROM1-203ENST00000502943 PCDHGA5Q9Y5G8 931 aa3□□□□□ -1.93
PROM1-203ENST00000502943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3□□□□□ -1.93
PROM1-203ENST00000502943 TRPV2Q9Y5S1 764 aa3□□□□□ -1.93
PROM1-203ENST00000502943 CLIC4Q9Y696 253 aa3□□□□□ -1.93
PROM1-203ENST00000502943 V9GYY5 206 aaPredicted RBP3□□□□□ -1.93
PROM1-203ENST00000502943 LAMA5O15230 3695 aa3□□□□□ -1.93
PROM1-203ENST00000502943 CROCCQ5TZA2 2017 aa3□□□□□ -1.93
PROM1-203ENST00000502943 SHROOM3Q8TF72 1996 aa3□□□□□ -1.93
PROM1-203ENST00000502943 CLUHO75153 1309 aa2.99□□□□□ -1.93
PROM1-203ENST00000502943 WDR19Q8NEZ3 1342 aa2.99□□□□□ -1.93
PROM1-203ENST00000502943 DMXL2Q8TDJ6 3036 aa2.99□□□□□ -1.93
PROM1-203ENST00000502943 PLXNA4Q9HCM2 1894 aa2.99□□□□□ -1.93
PROM1-203ENST00000502943 HECTD1Q9ULT8 2610 aa2.99□□□□□ -1.93
PROM1-203ENST00000502943 PIEZO2Q9H5I5 2752 aa2.99□□□□□ -1.93
PROM1-203ENST00000502943 A0A1B0GVL5 298 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms