RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 XKR6Q5GH73 641 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 NHSL2Q5HYW2 709 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 LRIF1Q5T3J3 769 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 CXorf57Q6NSI4 855 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 TRIM40Q6P9F5 258 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 TUBA3EQ6PEY2 450 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 STK32CQ86UX6 486 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 L3MBTL4Q8NA19 623 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 OR4A15Q8NGL6 344 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 PIH1D2Q8WWB5 315 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 TMBIM1Q969X1 311 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 SCRN2Q96FV2 425 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 EGFL7Q9UHF1 273 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 FNDC3AQ9Y2H6 1198 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 FAM32AQ9Y421 112 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 TSPAN11A1L157 253 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ZNF99A8MXY4 864 aaPredicted RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 MUSKO15146 869 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 HMGB3O15347 200 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 PQBP1O60828 265 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 NBNO60934 754 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 SORBS2O94875 1100 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 MTHFD2P13995 350 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 SOX6P35712 828 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 PSMD7P51665 324 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ARSFP54793 590 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 C21orf59P57076 290 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 HPCAP84074 193 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ECT2LQ008S8 904 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ACSM2AQ08AH3 577 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 CHRNA6Q15825 494 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 USP39Q53GS9 565 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 GPRC6AQ5T6X5 926 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 CPTPQ5TA50 214 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 CPZQ66K79 652 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ACSM2BQ68CK6 577 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 SLC2A7Q6PXP3 512 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 CYP2U1Q7Z449 544 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 RIMKLAQ8IXN7 391 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 RORBQ92753 470 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ISOC1Q96CN7 298 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 FAM210AQ96ND0 272 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 KCNA7Q96RP8 456 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 FAM83DQ9H4H8 585 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 RPF2Q9H7B2 306 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 CREG1O75629 220 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 F11P03951 625 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 PGRP06401 933 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 PIRTP0C851 137 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 IGFBP5P24593 272 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 MAGEA8P43361 318 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 OLR1P78380 273 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 LMAN2Q12907 356 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 VEZF1Q14119 521 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ABRAXAS2Q15018 415 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 FXNQ16595 210 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 FBXO43Q4G163 708 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 SETMARQ53H47 684 aaPredicted RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 GCNT6Q5T4J0 391 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 SLC39A5Q6ZMH5 540 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 HDDC2Q7Z4H3 204 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 GJD3Q8N144 294 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 OR9Q1Q8NGQ5 310 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ZNF566Q969W8 418 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 C3orf30Q96M34 536 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 NSUN5Q96P11 429 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 EFCAB11Q9BUY7 163 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 SGK2Q9HBY8 427 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 ITM2CQ9NQX7 267 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 DDX28Q9NUL7 540 aaKnown RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 RNF186Q9NXI6 227 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 OAZ3Q9UMX2 235 aa6.29□□□□□ -1.4
LINC00939-201ENST00000502479 DNMT3AQ9Y6K1 912 aaPredicted RBP6.29□□□□□ -1.4
LINC00939-201ENST00000502479 UPK3BL1B0FP48 263 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 MYO1GB0I1T2 1018 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 UPK3BL2E5RIL1 263 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 C1QTNF3-AMACRE9PGA6 284 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 CCL22O00626 93 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 SUV39H1O43463 412 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 KCNJ13O60928 360 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 UPP2O95045 317 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 SERPINA1P01009 418 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 F7P08709 466 aaPredicted RBP6.28□□□□□ -1.4
LINC00939-201ENST00000502479 CLTBP09497 229 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 PABPC1P11940 636 aaKnown RBP6.28□□□□□ -1.4
LINC00939-201ENST00000502479 PCNAP12004 261 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 FPR1P21462 350 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 AFF1P51825 1210 aaKnown RBP6.28□□□□□ -1.4
LINC00939-201ENST00000502479 COPZ1P61923 177 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 IRF8Q02556 426 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 TGM3Q08188 693 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 GRSF1Q12849 480 aaKnown RBP eCLIP6.28□□□□□ -1.4
LINC00939-201ENST00000502479 TRAF3Q13114 568 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 CAMK2GQ13555 558 aaPredicted RBP6.28□□□□□ -1.4
LINC00939-201ENST00000502479 BOP1Q14137 746 aaKnown RBP6.28□□□□□ -1.4
LINC00939-201ENST00000502479 TIMM50Q3ZCQ8 353 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 FRG2Q64ET8 278 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 PPP2R2DQ66LE6 453 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 GALNT18Q6P9A2 607 aa6.28□□□□□ -1.4
LINC00939-201ENST00000502479 ZNF554Q86TJ5 538 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms