RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 LCTLQ6UWM7 567 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 HIST3H2AQ7L7L0 130 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF551Q7Z340 670 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ATG9AQ7Z3C6 839 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 TSPAN33Q86UF1 283 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 NOXA1Q86UR1 476 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 PSTKQ8IV42 348 aaKnown RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 AQP12AQ8IXF9 295 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 PHC2Q8IXK0 858 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZDHHC23Q8IYP9 409 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 HACE1Q8IYU2 909 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 TMEM132CQ8N3T6 1108 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM109AQ8N4B1 249 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZCCHC9Q8N567 271 aaKnown RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 GBP7Q8N8V2 638 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 CNBD1Q8NA66 436 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 BBOF1Q8ND07 529 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 AKR7LQ8NHP1 331 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 CKAP2Q8WWK9 683 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 IGSF8Q969P0 613 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ITFG2Q969R8 447 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 SGF29Q96ES7 293 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 C14orf79Q96F83 325 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 OTUB1Q96FW1 271 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 KAZALD1Q96I82 304 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 EPSTI1Q96J88 318 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM81BQ96LP2 452 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 LRRC3BQ96PB8 259 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 CRAMP1Q96RY5 1269 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 SECISBP2Q96T21 854 aaKnown RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZBTB18Q99592 522 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 CCT7Q99832 543 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC39A3Q9BRY0 314 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 TBC1D10AQ9BXI6 508 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 EGLN1Q9GZT9 426 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 DDX47Q9H0S4 455 aaKnown RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 VCX2Q9H322 139 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 EVA1AQ9H8M9 152 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 SFXN1Q9H9B4 322 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 AKIP1Q9NQ31 210 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 TRIM36Q9NQ86 728 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM114A2Q9NRY5 505 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ABHD10Q9NUJ1 306 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 GDAP2Q9NXN4 497 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 TAS2R14Q9NYV8 317 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 NDUFA13Q9P0J0 144 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 FBXO4Q9UKT5 387 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 RNF150Q9ULK6 438 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ICKQ9UPZ9 632 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 NIP7Q9Y221 180 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 EXOC6BQ9Y2D4 811 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 RTL9Q8NET4 1388 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ADAMTSL1Q8N6G6 1762 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 A1L4Q6 167 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 GSAPA4D1B5 854 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ATP2A1O14983 1001 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 POLR3GO15318 223 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 LANCL1O43813 399 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 SSX5O60225 188 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM20BO75063 409 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 E2F6O75461 281 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 CREG1O75629 220 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 IDH1O75874 414 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 NCR1O76036 304 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 NXPH3O95157 252 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZFPL1O95159 310 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 NDUFA10O95299 355 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 MT-CYBP00156 380 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 C1RP00736 705 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 KRT8P05787 483 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 PGK2P07205 417 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 HOXB5P09067 269 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 CLUP10909 449 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 MYL6BP14649 208 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 UGT1A6P19224 532 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ITGB8P26012 769 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 CORO1AP31146 461 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 GPR143P51810 404 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 JAK3P52333 1124 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 HNRNPFP52597 415 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 VAV2P52735 878 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 OAZ1P54368 228 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 ADPRHP54922 357 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 FOLH1Q04609 750 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 RELQ04864 619 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 TNK1Q13470 666 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 DOC2AQ14183 400 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 RCN1Q15293 331 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 UGCGQ16739 394 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 CDO1Q16878 200 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 FAM98BQ52LJ0 330 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 SPOUT1Q5T280 376 aaKnown RBP4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 C20orf194Q5TEA3 1177 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 C1QL3Q5VWW1 255 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 METRNLQ641Q3 311 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 AADACL2Q6P093 401 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 MIS18BP1Q6P0N0 1132 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 PMF1Q6P1K2 205 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 FBXO42Q6P3S6 717 aa4.2□□□□□ -1.74
HMGB1P21-201ENST00000502313 RANBP10Q6VN20 620 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms