RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ZNF534Q76KX8 674 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 DCUN1D3Q8IWE4 304 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 DNAJC22Q8N4W6 341 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 ZNF655Q8N720 491 aaPredicted RBP11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 CLEC1AQ8NC01 280 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 CFAP61Q8NHU2 1237 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 FLVCR1-AS1Q8TAF5 88 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 DLG3Q92796 817 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 ZNF778Q96MU6 729 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 SLAMF7Q9NQ25 335 aa11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 INTS7Q9NVH2 962 aaKnown RBP11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 PTRH2Q9Y3E5 179 aaKnown RBP11.33□□□□□ -0.6
NUDCD3-211ENST00000497978 HECTD1Q9ULT8 2610 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 CYSRT1A8MQ03 144 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 H3BMH7 237 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 PRMT5O14744 637 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 KPNA5O15131 536 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 CD3EAPO15446 510 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 GPC4O75487 556 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 SORBS2O94875 1100 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 S1PR4O95977 384 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 ALPPP05187 535 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 GABRA4P48169 554 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 ARSFP54793 590 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 CCNG2Q16589 344 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 ZC3H12BQ5HYM0 836 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 JMJD6Q6NYC1 403 aaPredicted RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 GSTA5Q7RTV2 222 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 MRGPREQ86SM8 312 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 PRUNE1Q86TP1 453 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 GAS2L3Q86XJ1 694 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 RAB42Q8N4Z0 105 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 OR2Y1Q8NGV0 311 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 MAIP1Q8WWC4 291 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 PTERQ96BW5 349 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 GBP5Q96PP8 586 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 PANX3Q96QZ0 392 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 SMAD5Q99717 465 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 NUDT9Q9BW91 350 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 RAB11FIP5Q9BXF6 653 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 EIF2B3Q9NR50 452 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 CHRAC1Q9NRG0 131 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 EURLQ9NYK6 297 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 C5AR2Q9P296 337 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 DHCR7Q9UBM7 475 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 GNPTGQ9UJJ9 305 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 SLC39A10Q9ULF5 831 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 MAP4K5Q9Y4K4 846 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 MRFAP1Q9Y605 127 aa11.32□□□□□ -0.6
NUDCD3-211ENST00000497978 IQCF5A8MTL0 148 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 HCRTR1O43613 425 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 NDUFS3O75489 264 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 SLCO2B1O94956 709 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 FKBP9O95302 570 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 ZSCAN5DPP0CG00 497 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 PIM1P11309 404 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 GP1BBP13224 206 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 MAGP20916 626 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 CD9P21926 228 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 ALAS2P22557 587 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 GNLYP22749 145 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 AOAHP28039 575 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 PEBP1P30086 187 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 RPL22P35268 128 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 NPY2RP49146 381 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 SESN2P58004 480 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 BASP1P80723 227 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 SEMA3AQ14563 771 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 SLC9A5Q14940 896 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 SF1Q15637 639 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 NKAIN1Q4KMZ8 207 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 FHL5Q5TD97 284 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 MEI1Q5TIA1 1274 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 VWA5B1Q5TIE3 1220 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 LDB1Q86U70 411 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 LAPTM4BQ86VI4 370 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 LRRC6Q86X45 466 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 VRK3Q8IV63 474 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 MCATQ8IVS2 390 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 KRT222Q8N1A0 295 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 MPP5Q8N3R9 675 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 C2orf73Q8N5S3 287 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 OTUD6BQ8N6M0 293 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 OR2L8Q8NGY9 312 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 SKA2Q8WVK7 121 aaPredicted RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 PNPLA2Q96AD5 504 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 SLC29A3Q9BZD2 475 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 IL22Q9GZX6 179 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 LRRC4CQ9HCJ2 640 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 BFARQ9NZS9 450 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 MAP10Q9P2G4 905 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 CDYLQ9Y232 598 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 DRG1Q9Y295 367 aaKnown RBP11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 ZKSCAN5Q9Y2L8 839 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 NAV2Q8IVL1 2488 aa11.31□□□□□ -0.6
NUDCD3-211ENST00000497978 MAST4O15021 2626 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 PTPN13Q12923 2485 aa11.3□□□□□ -0.6
NUDCD3-211ENST00000497978 A0A1B0GX78 115 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms