RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 K7EPI3 171 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 RASGRP1O95267 797 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 MLYCDO95822 493 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 TNFP01375 233 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 WNT1P04628 370 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 SYPP08247 313 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 FGF4P08620 206 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 CD59P13987 128 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 CCR10P46092 362 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 BDKRB1P46663 353 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 PIK3CGP48736 1102 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 RPL14P50914 215 aaKnown RBP13.79□□□□□ -0.2
VPS26A-209ENST00000497564 BLKP51451 505 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 NOVA1P51513 510 aaKnown RBP13.79□□□□□ -0.2
VPS26A-209ENST00000497564 EIF2B5Q13144 721 aaKnown RBP13.79□□□□□ -0.2
VPS26A-209ENST00000497564 KIF19Q2TAC6 998 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 MBOAT1Q6ZNC8 495 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 LRRC70Q7Z2Q7 622 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 CUZD1Q86UP6 607 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 PARGQ86W56 976 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 WDR75Q8IWA0 830 aaKnown RBP13.79□□□□□ -0.2
VPS26A-209ENST00000497564 DCUN1D3Q8IWE4 304 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 ANKS4BQ8N8V4 417 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 CCDC197Q8NCU1 140 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 OR5K2Q8NHB8 316 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 CFAP61Q8NHU2 1237 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 C10orf82Q8WW14 230 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 TFGQ92734 400 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-209ENST00000497564 TSACCQ96A04 125 aaPredicted RBP13.79□□□□□ -0.2
VPS26A-209ENST00000497564 SKA1Q96BD8 255 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 CAMK1GQ96NX5 476 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 PLCD4Q9BRC7 762 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 ZBTB26Q9HCK0 441 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 NPHS2Q9NP85 383 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 ACSS2Q9NR19 701 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 DNAAF2Q9NVR5 837 aaKnown RBP13.79□□□□□ -0.2
VPS26A-209ENST00000497564 PNPOQ9NVS9 261 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 KCNK4Q9NYG8 393 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 KCNK6Q9Y257 313 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 PLEKHM1Q9Y4G2 1056 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 ASB1Q9Y576 335 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 SNX11Q9Y5W9 270 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 ST14Q9Y5Y6 855 aa13.79□□□□□ -0.2
VPS26A-209ENST00000497564 UBFD1O14562 309 aaKnown RBP13.78□□□□□ -0.2
VPS26A-209ENST00000497564 ZNF195O14628 629 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 STK16O75716 305 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 MPSTP25325 297 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 HSPA7P48741 367 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 AFF3P51826 1226 aaKnown RBP13.78□□□□□ -0.2
VPS26A-209ENST00000497564 CDH13P55290 713 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 PKNOX1P55347 436 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 FOXK2Q01167 660 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 CTBSQ01459 385 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 GTF2H2Q13888 395 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 ZXDCQ2QGD7 858 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-209ENST00000497564 HLA-BQ31612 363 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 CCSMST1Q4G0I0 132 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 GTF2H2CQ6P1K8 395 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 ABRAXAS1Q6UWZ7 409 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 PIP4P1Q86T03 277 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 HID1Q8IV36 788 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 TBC1D21Q8IYX1 336 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 CHCHD4Q8N4Q1 142 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-209ENST00000497564 OR9A1PQ8NGU1 263 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 GPBAR1Q8TDU6 330 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 AGAP11Q8TF27 550 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 RAD51AP1Q96B01 352 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 FAR2Q96K12 515 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 NSUN5Q96P11 429 aaKnown RBP13.78□□□□□ -0.2
VPS26A-209ENST00000497564 ZNF382Q96SR6 550 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 PKP4Q99569 1192 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 HGH1Q9BTY7 390 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 OSGEPL1Q9H4B0 414 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 SLC32A1Q9H598 525 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 STN1Q9H668 368 aaKnown RBP13.78□□□□□ -0.2
VPS26A-209ENST00000497564 GAREM1Q9H706 876 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 STOX2Q9P2F5 926 aaPredicted RBP13.78□□□□□ -0.2
VPS26A-209ENST00000497564 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 VTI1BQ9UEU0 232 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 ZDHHC2Q9UIJ5 367 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 ASF1AQ9Y294 204 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 ARL2BPQ9Y2Y0 163 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 USH1CQ9Y6N9 552 aa13.78□□□□□ -0.2
VPS26A-209ENST00000497564 A6NCN8 305 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 TLR4O00206 839 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 MATN2O00339 956 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 ADRB1P08588 477 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 ERGP11308 486 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 IMPA1P29218 277 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 GRB7Q14451 532 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 C18orf21Q32NC0 220 aaPredicted RBP13.77□□□□□ -0.21
VPS26A-209ENST00000497564 FBXO48Q5FWF7 155 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 PRAMEF14Q5SWL7 426 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 AGTRAPQ6RW13 159 aa13.77□□□□□ -0.21
VPS26A-209ENST00000497564 RPS27LQ71UM5 84 aaKnown RBP13.77□□□□□ -0.21
VPS26A-209ENST00000497564 RD3Q7Z3Z2 195 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms