RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 CYP2A13Q16696 494 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 AGTRAPQ6RW13 159 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 DBX2Q6ZNG2 339 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 TMEM26Q6ZUK4 368 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 NUDCD3Q8IVD9 361 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 LRRC56Q8IYG6 542 aaPredicted RBP17.72■□□□□ 0.43
RGP1-202ENST00000496906 EID2Q8N6I1 236 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 FAM181AQ8N9Y4 354 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 TMEM237Q96Q45 408 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 RAB11FIP5Q9BXF6 653 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 UCK1Q9HA47 277 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 LNPEPQ9UIQ6 1025 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 ASB1Q9Y576 335 aa17.72■□□□□ 0.43
RGP1-202ENST00000496906 TRIM13O60858 407 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 SIX3O95343 332 aaPredicted RBP17.71■□□□□ 0.43
RGP1-202ENST00000496906 SLC6A12P48065 614 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 HERVK_113P63132 956 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 FASTKQ14296 549 aaKnown RBP17.71■□□□□ 0.43
RGP1-202ENST00000496906 PLCL1Q15111 1095 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 PCBP2Q15366 365 aaKnown RBP eCLIP17.71■□□□□ 0.43
RGP1-202ENST00000496906 ANKS6Q68DC2 871 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 PRR23CQ6ZRP0 262 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 RAB44Q7Z6P3 723 aaPredicted RBP17.71■□□□□ 0.43
RGP1-202ENST00000496906 SYTL1Q8IYJ3 562 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 RAB42Q8N4Z0 105 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 LMNTD1Q8N9Z9 388 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 LCN9Q8WX39 176 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 JPH3Q8WXH2 748 aaPredicted RBP17.71■□□□□ 0.43
RGP1-202ENST00000496906 ESAMQ96AP7 390 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 L3HYPDHQ96EM0 354 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 APOLD1Q96LR9 279 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 ERVK-6Q9BXR3 956 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 ATG10Q9H0Y0 220 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 XKR8Q9H6D3 395 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 TMEM9BQ9NQ34 198 aa17.71■□□□□ 0.43
RGP1-202ENST00000496906 LY6G6EA0A0G2JKS1 128 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 LRRC14BA6NHZ5 514 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 E7ENX8 843 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 RPS17P08708 135 aaKnown RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 FGF3P11487 239 aaPredicted RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 EEF1DP29692 281 aaKnown RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 SHMT2P34897 504 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 HSPA7P48741 367 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 TAP2Q03519 686 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 PTCHD3Q3KNS1 767 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 ZNF678Q5SXM1 525 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 ZNF761Q86XN6 746 aaPredicted RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 LINC01555Q8NAE3 123 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 PPFIBP2Q8ND30 876 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 OR2L8Q8NGY9 312 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 OR56A3Q8NH54 315 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 HMGCLL1Q8TB92 370 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 SH3KBP1Q96B97 665 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 C1QTNF3Q9BXJ4 246 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 CD244Q9BZW8 370 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 BTBD3Q9Y2F9 522 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 TNPO3Q9Y5L0 923 aaKnown RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 RNF215Q9Y6U7 377 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 U3KQA8 63 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 LILRA5A6NI73 299 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 ZNF839A8K0R7 811 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 NUDT21O43809 227 aaKnown RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 STK16O75716 305 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 MYF5P13349 255 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 GLB1P16278 677 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 IMPDH1P20839 514 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 GDF5P43026 501 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 GRK6P43250 576 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 TBPL1P62380 186 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 SLC14A1Q13336 389 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 BIRC2Q13490 618 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 NAE1Q13564 534 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 TAX1BP1Q86VP1 789 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 AMIGO1Q86WK6 493 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 KLHDC8AQ8IYD2 350 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 OR6Y1Q8NGX8 325 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 SREK1Q8WXA9 508 aaKnown RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 PYCR2Q96C36 320 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 GATA5Q9BWX5 397 aaPredicted RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.7■□□□□ 0.42
RGP1-202ENST00000496906 OR6C2Q9NZP2 312 aa17.7■□□□□ 0.42
RGP1-202ENST00000496906 FAM221BA6H8Z2 402 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 FLRT2O43155 660 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 BGNP21810 368 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 NAGLUP54802 743 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 ASPHQ12797 758 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 NR0B2Q15466 257 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 CHI3L2Q15782 390 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 PDK4Q16654 411 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 PROX2Q3B8N5 592 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 INAVAQ3KP66 663 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 AASDHQ4L235 1098 aaPredicted RBP17.69■□□□□ 0.42
RGP1-202ENST00000496906 UNC50Q53HI1 259 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 METTL2BQ6P1Q9 378 aaKnown RBP17.69■□□□□ 0.42
RGP1-202ENST00000496906 ZCCHC23Q6ZST2 131 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 LRRC70Q7Z2Q7 622 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 ZNF438Q7Z4V0 828 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 OR4E2Q8NGC2 313 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 DYDC1Q8WWB3 177 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 MOCOSQ96EN8 888 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms